Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq215 127 5e-27 >seq215 Length=448669 Score = 127 bits (140), Expect = 5e-27 Identities = 186/257 (72%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 33 ATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGG 92 ||||||| ||||| | |||||||| ||||||| || ||||||| |||| | Sbjct 305293 ATTTCACCGAGTCCACATTTGAGACAGCATTCAGATCGTTATACCTTTCGTGCGGGTCAG 305234 Query 93 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||| | Sbjct 305233 AACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTATATTTACAGCCGCCGTTCAT 305174 Query 153 CGGGGCTTCGATCAAGAGCT-----TCGCGTTAGCT--AACCCCA--TCAATTAACCTTC 203 |||||||| | |||| | || || | ||| ||| | ||||||||| Sbjct 305173 TAGGGCTTCGGTTGTCAGCTATCAAACACG-AAGTTTGAACACCAGCTTCCTTAACCTTC 305115 Query 204 CGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG-TTTGCAGAGTGCTGTGT 262 ||| ||||||| ||| |||||||| | | | || || || |||| | ||||| Sbjct 305114 TAACACTGGGCAGGTATCAGCCCCTATAC-TGCGCATTACTGCTTGGCAGGGACTTGTGT 305056 Query 263 TTTTAATAAACAGTCGC 279 |||| ||||||||||| Sbjct 305055 TTTTGTTAAACAGTCGC 305039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260777746880