Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq215 246 1e-62 >seq215 Length=448669 Score = 246 bits (272), Expect = 1e-62 Identities = 346/480 (72%), Gaps = 17/480 (4%) Strand=Plus/Minus Query 101 CATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGG 160 ||| ||| |||||||| || || | | |||||| |||||| |||||| | Sbjct 304159 CATTCAGAGCTCTACCGCCAATTGGATAAGCTTGACGCTATTCCTAAAAATATTTCGAAG 304100 Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCA 220 ||||||||||||| | ||| ||||||| |||||||||| ||||| ||||||| | Sbjct 304099 AGAACCAGCTATCTCCGTGTTCGATTGGCATTTCACCCCTTACCACAAGTCATCCAAACC 304040 Query 221 GTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCA 280 ||| ||| | |||||||||||||| || ||||| ||||||||||| || Sbjct 304039 CTTTAAAACGGATACTGGTTCGGTCCTCCAAATCGTGTTACCGATTCTTCAACCTGCTCA 303980 Query 281 TGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCG 340 ||| || |||| | ||||||||| | | | ||| | |||| |||||| ||||| Sbjct 303979 TGGTAAGCTCACACGGTTTCGGGTCTACAACCTAAGACTAAAACGCTCTATTCAAACTCG 303920 Query 341 CTTTCGCTACGGCTACCCC-ACACGGGTTAACCTCGCGACACAACGCA-AACTCGCAGGC 398 ||||||||||| || | | | |||| ||||| | || || ||||||| ||| Sbjct 303919 CTTTCGCTACGACTCCGTTTATTCAACTTAATCTCGC--CTTAAATCATAACTCGCCGGC 303862 Query 399 TCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGAT 458 |||| || |||||||||||| |||| ||| || || ||| | || | | Sbjct 303861 TCATGCTGCAAAAGGCACGCTATCAC-----ACCATAATGGTGCTTTAACTTC------T 303813 Query 459 TGTAGGCACATGGTTTCAGG-TACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTC 517 |||| ||| | |||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 303812 TGTATGCATGTAGTTTCAGGATACTATTTCACTCCCCTTGCGGGGTACTTTTCACCTTTC 303753 Query 518 CCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 |||||||||||| |||| |||||||||| || |||||||||||| ||||| ||||| Sbjct 303752 CCTCACGGTACTGGTCCACTATCGGTCATTAATTCGTATTTAGGCTT-ACGGGGTGTCCC 303694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817567919360