Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq215 176 7e-42 >seq215 Length=448669 Score = 176 bits (194), Expect = 7e-42 Identities = 210/280 (75%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| ||| || |||||| |||||| | | | | | |||||||| |||||| Sbjct 302325 CCCATGCTCTCATGCCTCAACGTCAGAAAAAGAATCGTTAGCTGCCTTCGCTCTTGGTGT 302266 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| ||| || ||||||||||||||| |||| |||||| | | ||| | | Sbjct 302265 TCCTTGATATCTCCACGCATTTCACCGCTCCACATCAAATTCCACTAACGTCTTCTTATC 302206 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGC-CCATAGTTTTCACATCTGA 178 || |||||| |||| ||||| || | |||| ||||||| |||| | || || | ||| Sbjct 302205 TCGAGAAAAGCAGTCTCAAAGGCGGA--ATGGAGTTGAGCTCCAT-GATTAAACCTTTGA 302149 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||||| | ||| |||| | || ||| |||||||||||||||||||||| |||||||| Sbjct 302148 CTTGCAATTCCGTCTACGCATACTATACGCCCAATAAATCCGGATAACGCTCGCCACCTA 302089 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||||||| |||||||||||||||||| | || ||| Sbjct 302088 CGTATTACCGCGACTGCTGGCACGTAGTTAGTCATGACTT 302049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828785828815