Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq69 107 2e-21 seq1 95.1 1e-17 seq684 75.2 1e-11 >seq69 Length=1309886 Score = 107 bits (118), Expect = 2e-21 Identities = 137/182 (75%), Gaps = 10/182 (5%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAAT--ACATTAC- 66 || ||||||||||||||||| ||| |||||||||||||| | || | ||| || Sbjct 358049 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCC---GACCGCCTGGACAGCACA 357993 Query 67 -CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGT 124 ||||||||||| ||||||||| | |||||||||| || ||||| | ||| | | || Sbjct 357992 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGT 357935 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||| |||| | ||| | |||||| | ||||| ||| | ||||||||||||||| Sbjct 357934 AATGCTAAAGAAGGACTGACGGGGGCATTCGTATTGCGGTGTGAGAGGTGAAATTCTTGG 357875 Query 185 AT 186 || Sbjct 357874 AT 357873 Score = 84.2 bits (92), Expect = 2e-14 Identities = 107/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCA 68 || ||||||||||||||||| ||| |||||||||||||| || | | | | || Sbjct 381328 ACGTTTACTTTGAAAAAATTGGAGTGTTCAAAGCAGGCCGACCGCCTGGACAGCAGAGCA 381269 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||||||||| | |||||||||| || ||||| | ||| | | ||||| Sbjct 381268 TGGAATAATGGAATAGGACCT-CGGTTCTATTGCGTTGGTTT-TCGGAACTCGAGGTAAT 381211 Query 128 GATAAATACGGATAGTCGGGGG 149 ||| || | ||| | |||||| Sbjct 381210 GATTAAGAGGGACTGACGGGGG 381189 >seq1 Length=6091339 Score = 95.1 bits (104), Expect = 1e-17 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG--CTCGAATACATTACCATGG 71 || ||| ||||||| | ||| |||||||||||||| || || || | ||||| Sbjct 5357814 TTTCTTCGAAAAAACTGGAGTGTTCAAAGCAGGCCGACCACCTGGACAGCAG-AGCATGG 5357872 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||| ||| ||||| | || |||||||| Sbjct 5357873 AATAATGGAATAGGACCT-CGGTTCTATTGTGTTGGTTTTCGGAACTTGAGGTAATGATT 5357931 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || | ||| | || ||| | ||||| | ||||| ||||||||||||||||| Sbjct 5357932 AAGAGGGACTGACGAGGGCATTTGTATTGCAGTGTCAGAGGTGAAATTCTTGGAT 5357986 >seq684 Length=18019 Score = 75.2 bits (82), Expect = 1e-11 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCA 68 || ||| |||| |||||| | ||| ||||||| |||||| || | | | | | || Sbjct 4451 ACGTTTTCTTTAAAAAAAATGGAGTGTTCAAATCAGGCCGACCGCCTGGACAACTGAGCA 4392 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA-T 127 ||||||||| ||||| ||| | ||||||||| || ||||| | ||| | | | || | Sbjct 4391 TGGAATAATGGAATAAGACCTT-GGTTCTATTACGTTGGTTT-TCGGAACTCGAGGAAAT 4334 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| | | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 4333 GATTTAGAGGGACTGACGGGGGCATTTGTATTGCGGTGTGAGAGGTGAAATTCTTGGAT 4275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511991245600