Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq215 201 3e-49 >seq215 Length=448669 Score = 201 bits (222), Expect = 3e-49 Identities = 282/390 (72%), Gaps = 13/390 (3%) Strand=Plus/Plus Query 22 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 81 |||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| || Sbjct 302058 CTAACTACGTGCCAGCAGTCGCGGTAATACGTAGGTGGCGAGCGTTATCCGGATTTATTG 302117 Query 82 GGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCC 141 |||||| || ||||||| || | |||||| |||| || | ||||||| || Sbjct 302118 GGCGTATAGTATGCGTAGACGGAATTGCAAGTCAAAGGTTTAATCATGGAGCTCAACTCC 302177 Query 142 GGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGT 201 | || ||||| ||||| || ||| || || | ||||||||| ||| Sbjct 302178 -ATTCCGCCTTTGAGACTGCTTTTCTCGAGATAAGAAGACGTTAGTGGAATTTGATGTGG 302236 Query 202 AGCGGTGAAATGCGT--AGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 ||||||||||||||| |||||| | |||||||||| |||||||| ||| | | Sbjct 302237 AGCGGTGAAATGCGTGGAGATATCA--AGGAACACCAAGAGCGAAGGCAGCTAACGATTC 302294 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 | | ||||| |||||| || ||| |||||||| || ||||||||||||| ||||| Sbjct 302295 TTTTTCTGACGTTGAGGCATGAGAGCATGGGGAGCCAATCGGATTAGATACCCGAGTAGT 302354 Query 320 CCA-CGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGC 378 ||| || ||||||||||| | |||| ||| || | || | || || ||| Sbjct 302355 CCATAGCTGTAAACGATGAGTGCTAGATGT------TAATTATTGAT-TAGTATCGAAGC 302407 Query 379 AAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||||| |||| | ||| ||||||||||| Sbjct 302408 TAACGCGTTAAGCACTCCGCCTGGGGAGTA 302437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203178763520