Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3 194 1e-44 seq31 113 4e-20 seq61 86.0 5e-12 >seq3 Length=4565964 Score = 194 bits (214), Expect = 1e-44 Identities = 220/295 (75%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 61082 AGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCG 61141 |||| || ||| |||||||||||||| || || || |||||||| || |||||||| | Sbjct 1995864 AGGACATCTGGGAGATGTACAAAAAGGCCGAGGCGTCTTTCTGGACAGTAGAGGAGGTTG 1995805 Query 61142 ATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTA 61201 || | ||||| || | |||||||| | || | || |||| ||||| Sbjct 1995804 ATCTCTCCAAGGATCTACCGGACTGGGAAATGCTCAAGAAGGAGGAGAAACACTTCATCT 1995745 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 ||||| |||| ||||||||||| ||||| |||||||||||||| || |||| | Sbjct 1995744 CGCATGTCCTGGCCTTCTTTGCCGCCAGTGACGGCATCGTCAATGAGAACTTGGTGGAGC 1995685 Query 61262 GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 | ||| ||||||||||| ||| | ||||| || || ||||| ||||||||||| |||| Sbjct 1995684 GCTTCAGCCAGGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTATGGCTTCCAGATAGCCA 1995625 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 | ||||| ||||||| ||||||||||| | || ||||| || |||||| |||| Sbjct 1995624 TCGAGAACATCCACTCAGAGATGTACAGCTTGCTTATCGACACCTACATCCGGGA 1995570 >seq31 Length=3510018 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT 66298 ||||||||||| | || || | ||||| ||||||| | ||| | || || Sbjct 1270089 TGTTCGTAGAGTTTGTCAAACTCCTTGCCCCAGCACTCGGACAACCCTGGGCTCTCGTTG 1270030 Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || |||||||| |||| || || | || | || | ||| || || || |||||| Sbjct 1270029 GGGCACATCAGGCACCAGTCCTGGTCGTTCTCAATGCGCCTCATGAACAGGTCTGGTATC 1269970 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || |||||||||||||| || || || || ||||| || ||||||| || || || Sbjct 1269969 CACAGGGCGTAGAAGAGGTCACGGGCCCGCTGCTCTTCCTTGCCGTGGTTCTTCTTGCAG 1269910 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || ||||| || ||||||||||| ||||| || |||||||| | ||| || Sbjct 1269909 TCCAGGAAATCGAAGATGTCGGCGTGCCAGGGCTCCAGGTACACGGCAAA 1269860 >seq61 Length=1822817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 ||||||||||||||| || || | |||| |||||||| || ||||| |||||||| Sbjct 745752 TGAACAACATTTCATCAAGCACATCCTGGCATTCTTTGCAGCAAGTGACGGCATCGTCAA 745811 Query 61245 TGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||||||| || | || | || | || || || || | | || || | |||||||| Sbjct 745812 TGAGAATCTAGTAGAGAGGTTTGGTCAAGAAGTTCAGATTCCTGAAGCAAGATGTTTCTA 745871 Query 61305 CGGCTTCCAGATTGCCATGGAG 61326 |||||||| || || |||||| Sbjct 745872 TGGCTTCCAAATGGCAATGGAG 745893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397559447939600