Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq708 78.8 6e-13 seq158 78.8 6e-13 >seq708 Length=204443 Score = 78.8 bits (86), Expect = 6e-13 Identities = 61/70 (87%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| |||||||| || || || |||||||| ||||||||||| |||||||||||||| Sbjct 8445 AAAGGCCTCACTAAACCGTTCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 8388 Query 103 GGGACGTAAT 112 |||||||||| Sbjct 8387 GGGACGTAAT 8378 >seq158 Length=676796 Score = 78.8 bits (86), Expect = 6e-13 Identities = 61/70 (87%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| |||||||| || || || |||||||| ||||||||||| |||||||||||||| Sbjct 664062 AAAGGCCTCACTAAACCGTTCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 664005 Query 103 GGGACGTAAT 112 |||||||||| Sbjct 664004 GGGACGTAAT 663995 Score = 75.2 bits (82), Expect = 7e-12 Identities = 60/70 (86%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 43 AAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCA 102 |||| |||||||| || || || |||||||| ||||||||||| |||||||||||||| Sbjct 674774 AAAGGCCTCACTAAACCGTTCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCA 674717 Query 103 GGGACGTAAT 112 ||||| |||| Sbjct 674716 GGGACATAAT 674707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300793172780