Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq158 141 2e-31 seq708 136 7e-30 seq1133 132 9e-29 seq136 132 9e-29 seq1265 131 3e-28 seq249 129 1e-27 seq813 123 5e-26 seq411 111 3e-22 seq1389 98.7 2e-18 seq641 95.1 2e-17 seq1141 86.0 1e-14 >seq158 Length=676796 Score = 141 bits (156), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 663795 GAGGCAATAACAGGTCTGTGATGCCCTTGGATGTTCCGGGCCGCACGCGCGCTACACTGA 663854 Query 171 CAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTA-----ATCTTGTTAAAC 224 | || ||||| || || | ||| || | ||| | | |||| || Sbjct 663855 GCGCCGCAGCGAGTCTCGTCCGGCTTCCCGCTAG--CGGGGAAGCTCGACCTTG-CAACG 663911 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | |||||||||||| ||| |||||| | ||| |||||||||| ||||||| Sbjct 663912 GCGTTCGTGCTGGGGACAGACGGCTGCAATCGTCCGTCTCGAACGAGGAATTCCTAGTAG 663971 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| |||| || | |||| |||||||||||||||||||||| Sbjct 663972 GCGCCGGTCACCAACCGGCGTCGATTACGTCCCTGCCCTTTGTA 664015 Score = 132 bits (146), Expect = 9e-29 Identities = 166/224 (74%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 674507 GAGGCAATAACAGGTCTGTGATGCCCTTGGATGTTCTGGGCCGCATGCGCGCTACACTGA 674566 Query 171 CAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTA-----ATCTTGTTAAAC 224 | || ||||| || || | ||| || | ||| | | |||| || Sbjct 674567 GCGCCGCAGCGAGTCTCGTCCGGCTTCCCGCTAG--CGGGGAAGCTCGACCTTG-CAACG 674623 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | |||||||||||| ||| || ||| | ||| |||||||||| ||||||| Sbjct 674624 GCGTTCGTGCTGGGGACAGACAGCTGTAATCGTCCGTCTCGAACGAGGAATTCCTAGTAG 674683 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| |||| || | |||| ||||| |||||||||||||||| Sbjct 674684 GCGCTGGTCACCAACCGGCGTCGATTATGTCCCTGCCCTTTGTA 674727 >seq708 Length=204443 Score = 136 bits (150), Expect = 7e-30 Identities = 166/223 (74%), Gaps = 9/223 (4%) Strand=Plus/Plus Query 112 AGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 8179 AGGCAATAACAGGTCTGTGATGCCCTTGGATGTTCCGGGCCGCACGCGCGCTACACTGAG 8238 Query 172 AGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTA-----ATCTTGTTAAACT 225 | || | ||| || || | ||| || | ||| | | |||| || Sbjct 8239 CGCCGCAGCAAGTCTCGTCCGGCTTCCCGCTAG--CGGGGAAGCTCGACCTTG-CAACGG 8295 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | |||||||||||| ||| |||||| | ||| |||||||||| ||||||| | Sbjct 8296 CGTTCGTGCTGGGGACAGACGGCTGCAATCGTCCGTCTCGAACGAGGAATTCCTAGTAGG 8355 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| |||| || | |||| |||||||||||||||||||||| Sbjct 8356 CGCCGGTCACCAACCGGCGTCGATTACGTCCCTGCCCTTTGTA 8398 >seq1133 Length=75797 Score = 132 bits (146), Expect = 9e-29 Identities = 167/226 (74%), Gaps = 14/226 (6%) Strand=Plus/Minus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||||||||||||||||||||| || |||||| | ||||||||||| Sbjct 43493 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCCGGCCCGCACACACGCTACACTGA 43434 Query 171 CAGAGCCAACGAG--TTC-----ATCAC-CTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 | ||| ||| ||| || | || | ||||| || || |||| | Sbjct 43433 GCGCAGCAATGAGTCTTCTCGGGTTCCCGCTAGCGGGGAAGCTC-----AACCTTGCAAT 43379 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | || ||||||||| ||| ||||||| || |||| |||||||||| |||||| Sbjct 43378 GATGT-TCATGCTGGGGAAAGACGGCTGCAATTGTTTGTCTTGAACGAGGAATTCCTAGT 43320 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||| |||| || | |||| ||||| | |||||||||||||| Sbjct 43319 AGGCGCCGGTCACCAACTGGCGTCGATTATGCCCCTGCCCTTTGTA 43274 >seq136 Length=742492 Score = 132 bits (146), Expect = 9e-29 Identities = 193/267 (72%), Gaps = 18/267 (7%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||| |||| |||||||| | | ||||||||||||||||| Sbjct 600882 TCTTAGAGGGACTGCCGGCGACGTGTCAAGCCGGAGTCGGC--GAGGCAATAACAGGTCT 600825 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 ||||||||||||||| ||| ||||| ||| |||||||| |||| | || |||| || Sbjct 600824 GTGATGCCCTTAGATATTCCGGGCCACACACGCGCTACGCTGAGCGCCGCAGCGAG-TCT 600766 Query 188 TCAC-CTTGGCCGGAAGGTCTGGGTAATCTTG---TT--AAACTCTGTCGTGCTGGGGAT 241 || | | ||| || ||| || |||| || || | | |||||||||| Sbjct 600765 TCTCGGGTTCCCGCTAG---CGGGGAAGCTTGACCTTGCAACGGCGTTTGTGCTGGGGAA 600709 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 |||| ||||||| || |||| ||||| |||| ||||||| || | |||| || | Sbjct 600708 AGAGGGCTGCAATTGTTCGTCTTGAACGAAGAATTCCTAGTAGGCACCGGTCACCACCCG 600649 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||| |||||||| Sbjct 600648 GCGTCGATTACGTCCCTGACCTTTGTA 600622 >seq1265 Length=56461 Score = 131 bits (144), Expect = 3e-28 Identities = 169/226 (75%), Gaps = 13/226 (6%) Strand=Plus/Minus Query 110 TGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| Sbjct 4995 TGAGGCAATAACAGGTCTGTGATGCCCTTAAATGTTCCGGGCCGCACACGCGCTACACTG 4936 Query 170 ACAGAGCCAACGAGT-TCATC----ACCT--TGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 | | || ||||| | || ||| |||| || | | || | | |||| || Sbjct 4935 AGCGCTGCAGCGAGTCTTCTCGGGTTCCTGCTGGCGGGGAAG-CTCG---ACCTTG-CAA 4881 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 | | |||||||||| || | ||||| || |||| |||||||||| |||||| Sbjct 4880 CGGCATTTGTGCTGGGGAATGATGGCTACAATTGTTCGTCTTGAACGAGGAATTCCTAGT 4821 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||| |||| || | ||| | |||||| ||||||||||||||| Sbjct 4820 AGGCGCCGGTCACCAAC-CGCCTCGATTACATCCCTGCCCTTTGTA 4776 Score = 80.6 bits (88), Expect = 5e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct 3208 GCAATAACAGGGCTGTGATGCCCTTAGATGTTCCAGGCAGCACACGCGCTACACTGA 3152 >seq249 Length=509689 Score = 129 bits (142), Expect = 1e-27 Identities = 166/224 (74%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 || ||| ||||||||||||||||||||||||| ||| |||| ||| ||| ||||||||| Sbjct 384893 GAAGCATTAACAGGTCTGTGATGCCCTTAGATCTTCCAGGCCACACACGCACTACACTGA 384834 Query 171 CAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTG---TTAAACT- 225 | || ||||| || ||| || ||| || ||| || || | || | | Sbjct 384833 GCGCCACAGCGAGTCTCCTCAGGTTC-CCGCTAGC---GGGGAAGCTCGACCTTGCAATG 384778 Query 226 -CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | |||||||||||| ||| ||||||| || |||| ||||| |||| ||||||| Sbjct 384777 GCGTTCGTGCTGGGGAAAGACGGCTGCAATTGTTCGTCTTGAACGAAGAATTCCTAGTAG 384718 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| |||| || | ||||||||||| ||||||||||||||| Sbjct 384717 GCGCCGGTCACCAACGGGCGTTGATTACATCCCTGCCCTTTGTA 384674 >seq813 Length=160490 Score = 123 bits (136), Expect = 5e-26 Identities = 192/271 (71%), Gaps = 30/271 (11%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||| |||| |||||||| | | |||| |||||||||||| Sbjct 129846 TCTTAGAGGGACTGCCGGCGGCGCGTCAAGCCGGAGTCGGC--GAGGTAATAACAGGTCT 129903 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA----CAGAGCCAA---- 179 ||||||||||| |||||||||||||| ||||||||||||| || ||| | Sbjct 129904 GTGATGCCCTT----GTTCTGGGCCGCACACGCGCTACACTGAGCGCCACAGCAAGTCTT 129959 Query 180 --CGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGG 237 || |||| | || | ||||| || | |||| || | ||||||||| Sbjct 129960 CTCGGGTTC--CCGCTAGCGGGGAAGCTCC-----ACCTTGC-AACGGCGTTCGTGCTGG 130011 Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 ||| ||| ||||||| || |||| |||||||| | ||||||| |||| |||| || Sbjct 130012 GGAAAGACGGCTGCAATTGTTTGTCTTGAACGAGGAGTTCCTAGTAGGCGCTGGTCACCA 130071 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || ||||| |||||||||||||||||| Sbjct 130072 ACCGGCTTTGATCACGTCCCTGCCCTTTGTA 130102 >seq411 Length=362868 Score = 111 bits (122), Expect = 3e-22 Identities = 187/267 (70%), Gaps = 28/267 (10%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 || |||||||||| |||| |||||||| | || ||| ||||||||||||| Sbjct 100269 TCCTAGAGGGACTGCCGGCAACGTGTCAAGCCGGAGTCAGC--GAGACAATAACAGGTCT 100326 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TC 186 ||||||||||||||| ||| ||||||| | ||||||||||||| ||| |||| | Sbjct 100327 GTGATGCCCTTAGATATTCCGGGCCGCCCACGCGCTACACTGAGCCCCGCAAAGAGTCTT 100386 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTG----TTAAACTCTG-TCGTGCTGGGGAT 241 ||| || ||| || |||| || || | | ||| || || |||||| Sbjct 100387 CTCAGGTT-CCCGCTAG---TGGGCAAGCTCGACCTTGCAACGGTGTTCATGCTGG---- 100438 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 |||||||| || |||| || ||||| ||||||| |||| |||| || | Sbjct 100439 ------TTGCAATTGTTTGTCTTGAAGAAGGAAATCCTAGTAGGCGCCGGTCACCAACCT 100492 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| | |||||||||||||||||||| Sbjct 100493 GCGTCGTTTACGTCCCTGCCCTTTGTA 100519 >seq1389 Length=43855 Score = 98.7 bits (108), Expect = 2e-18 Identities = 84/103 (82%), Gaps = 8/103 (8%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 |||||||||||| |||| |||||||| | || ||||||||||||||||| Sbjct 11711 TCTTAGAGGGACCGCCGGCGACGCGTCAAGCCGGAGTCGGT--GAGGCAATAACAGGTCT 11768 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||| |||||||||| |||||| ||||||||||||| Sbjct 11769 GTGATGCCCTTTGATGTTCTGGACCGCACACGCGCTACACTGA 11811 >seq641 Length=230097 Score = 95.1 bits (104), Expect = 2e-17 Identities = 83/103 (81%), Gaps = 8/103 (8%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||| |||| |||||||| | | ||||||||||||||||| Sbjct 100544 TCTTAGAGGGACTGCCGGCGACACGTCAAGCCGGAGTCGGC--GAGGCAATAACAGGTCT 100601 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||| |||||||||||||| ||||| ||| ||||||||||||| Sbjct 100602 GTGAAGCCCTTAGATGTTCCGGGCCACACACGCGCTACACTGA 100644 >seq1141 Length=74593 Score = 86.0 bits (94), Expect = 1e-14 Identities = 81/103 (79%), Gaps = 8/103 (8%) Strand=Plus/Minus Query 74 TCTTAGAGGGACTATCGGC------TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||| |||| |||||||| | | |||||| |||||||||| Sbjct 18645 TCTTAGAGGGACTGCCGGCAACGCGTCAAGCCGGAGTCGGC--GAGGCAGTAACAGGTCT 18588 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||| |||||||| ||||||||| |||||||||| || Sbjct 18587 GTGATGCCCCTAGATGTTTAGGGCCGCACACGCGCTACACGGA 18545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947177068288