Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Adineta_20vaga_20[genbank_20GCA_5F000513175.1_202013-11-26] 36,167 sequences; 217,933,776 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq417 123 2e-23 seq83 114 1e-20 seq15 104 2e-17 seq163 100 2e-16 seq18856 93.3 3e-14 >seq417 Length=153455 Score = 123 bits (136), Expect = 2e-23 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 61132 GAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAA 61191 || || || ||||| |||| || |||| || ||| |||||| | || ||||||| Sbjct 95023 GAAGAAGTTGATTTAGCCAATGATATGAGAGATTGGTTACGTTTAACTCCCGATGAACAA 94964 Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 |||| || |||||||| ||||| || ||||| || || ||||| ||| ||| ||| Sbjct 94963 TATTTTATCAAACATGTCTTGGCTTTTTTTGCTGCAAGTGATGGTATTGTCGGTGAAAAT 94904 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 ||| | |||| || | || || ||| | | || || |||||||||||||| || Sbjct 94903 TTAGTTGAACAATTTTCCGGTGAAGTTCAAATACCTGAAGCACGTTGTTTCTACGGATTT 94844 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || ||||| || || ||| | || || || ||||| ||| | || || ||||| |||||| Sbjct 94843 CAAATTGCAATTGAAAATATTCATTCAGAAATGTATAGTTTACTTATTGATACATACATC 94784 Query 61372 A 61372 | Sbjct 94783 A 94783 >seq83 Length=472686 Score = 114 bits (126), Expect = 1e-20 Identities = 170/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 61132 GAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAA 61191 || || || ||||| |||| || |||| || ||| |||||| | || ||||||| Sbjct 432544 GAAGAAGTTGATTTAGCCAATGATATGAGAGATTGGTTACGTTTAACTCCCGATGAACAA 432603 Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 |||| || |||||||| || || || ||||| || || ||||| ||| ||| ||| Sbjct 432604 TATTTTATCAAACATGTCTTAGCTTTTTTTGCTGCAAGTGATGGTATTGTCGGTGAAAAT 432663 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 ||| | |||| || | || || ||| | | || || ||||||||||| || || Sbjct 432664 TTAGTTGAACAATTTTCCGGTGAAGTTCAAATACCTGAAGCACGTTGTTTCTATGGATTT 432723 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || ||||| || || ||| | || || || ||||| ||| | || || ||||| |||||| Sbjct 432724 CAAATTGCAATTGAAAATATTCATTCAGAAATGTATAGTTTACTTATTGATACATACATC 432783 Query 61372 A 61372 | Sbjct 432784 A 432784 >seq15 Length=819560 Score = 104 bits (114), Expect = 2e-17 Identities = 300/460 (65%), Gaps = 4/460 (1%) Strand=Plus/Minus Query 66004 AAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAAT 66063 ||| |||| ||||| | || || ||||| | || | || || ||||| || | ||| Sbjct 384306 AAGTGCAATTGATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAAT 384247 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 ||| || || | ||| || | || || || | || ||||||||||| || ||| Sbjct 384246 TTCCGTACATAAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATT 384187 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183 || ||| || || | |||| | || || || || |||| ||| | | | || || Sbjct 384186 ACACTGATCTTTATATAGCATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGC 384127 Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA--CCTTTGCGTTCGTAATGT 66241 ||||||| | |||| || | |||||| || || | |||| |||| || | | Sbjct 384126 AAACCAAAGATCTTGTGCTTTAATTGTACGT--CGTCCAAGACCTTCCTGTTCATATTTT 384069 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 || | | |||||| || ||||| || | | | | ||| | |||||| Sbjct 384068 GTATATAAATCTTCGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGA 384009 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 ||||| | | ||| | | | ||| |||||||||||||||| ||| || ||||| Sbjct 384008 CACATTAATGTCCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCAT 383949 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 | ||| |||||||| || || |||| || ||| || |||||| || || Sbjct 383948 AAGGCTGGAAAGAGATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCC 383889 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGA 66461 | || |||||||| || |||||||||||||||| |||| Sbjct 383888 AAAAATTCAAAGATATCCGCATGCCATGGTTCCAAATAGA 383849 Score = 104 bits (114), Expect = 2e-17 Identities = 300/460 (65%), Gaps = 4/460 (1%) Strand=Plus/Plus Query 66004 AAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAAT 66063 ||| |||| ||||| | || || ||||| | || | || || ||||| || | ||| Sbjct 550527 AAGTGCAATTGATGCCAAATTACAAACAGCAACTTCATTTGGTGCTGTATATTCAATAAT 550586 Query 66064 TTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATT 66123 ||| || || | ||| || | || || || | || ||||||||||| || ||| Sbjct 550587 TTCCGTACATAAATTTGAACAATGAATTGTACCAAGATGTTGTTGATTACTTTTAGCATT 550646 Query 66124 GCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGC 66183 || ||| || || | |||| | || || || || |||| ||| | | | || || Sbjct 550647 ACACTGATCTTTATATAACATGAATGGTGTACCAGTTTCAATTTGTGCATTGACAATAGC 550706 Query 66184 GTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA--CCTTTGCGTTCGTAATGT 66241 ||||||| | |||| || | |||||| || || | |||| |||| || | | Sbjct 550707 AAACCAAAGATCTTGTGCTTTAATTGTACGT--CGTCCAAGACCTTCCTGTTCATATTTT 550764 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301 || | | |||||| || ||||| || | | | | ||| | |||||| Sbjct 550765 GTATATAAATCTTCGAATTCTTTTCCCCAAACATTTTGTAAATGTTTACATTGATGTGGA 550824 Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361 ||||| | | ||| | | | ||| |||||||||||||||| ||| || ||||| Sbjct 550825 CACATTAATGTCCATTTTTCGTTAGCTTCAACACGACGCATAAATAAATCCGGAATCCAT 550884 Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCG 66421 | || |||||||| || || |||| || ||| || |||||| || || Sbjct 550885 AAAGCTGGAAAGAGATCACGAGCACGTTTTTCTTCAGCACCAGTATTTTTTCGTGCATCC 550944 Query 66422 AGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGA 66461 | ||||||||||| || |||||||||||||||| |||| Sbjct 550945 AAAAACTCAAAGATATCCGCATGCCATGGTTCCAAATAGA 550984 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 65152 CCAAGCATAGAAATGCATCGATGATAATTT-TGCATAATTCGGCTCGGCCACATGCATAT 65210 |||||||||||||||||| ||||| | ||| | |||| || || || || | ||| |||| Sbjct 549428 CCAAGCATAGAAATGCATTGATGAGAGTTTATTCATAGTT-GGTTCAGCAATATGAATAT 549486 Query 65211 TCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATA 65266 | || || ||| ||||| ||| || ||||||||| |||||||||| ||| ||| Sbjct 549487 TTAATGATTGAGATTGATCAATGAAAGCACCACGATCAGCAGCCATGTTAATAATA 549542 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/140 (75%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 ||| ||| ||||||| || |||||||| |||||||||| | || || || || || Sbjct 550201 TGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTC 550260 Query 65785 GTACGGCATACCCATCAGGACAAAA-GTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 | | || | | ||||| ||| || || || || ||||||||||| |||||||| || | Sbjct 550261 GAATGGAAATCGCATCAA-ACAGAATGTATCAGCAAGACCTTGAACACCAATACCAATTG 550319 Query 65844 GACGATGACGCAAATTGGAA 65863 |||||||||| | ||| ||| Sbjct 550320 GACGATGACGAAGATTAGAA 550339 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/139 (75%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 ||| ||| ||||||| || |||||||| |||||||||| | || || || || || Sbjct 384632 TGCAGCATAATAAATTGTTTCGAAAATATCACGATTAAGTTGTTGAGCTTCTTCACTTTC 384573 Query 65785 GTACGGCATACCCATCAGGACAAAA-GTGTCGGCCAGACCTTGAACTCCAATACCGATGG 65843 | | || | | ||||| ||| || || || || ||||||||||| |||||||| || | Sbjct 384572 GAATGGAAATCGCATCAA-ACAGAATGTATCAGCAAGACCTTGAACACCAATACCAATTG 384514 Query 65844 GACGATGACGCAAATTGGA 65862 |||||||||| | ||| || Sbjct 384513 GACGATGACGAAGATTAGA 384495 >seq163 Length=332407 Score = 100 bits (110), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || ||||||||||| ||| |||| ||||| |||||| |||||||| | | Sbjct 173392 TTATTCAATGCCATTTCAACGTTACCATATGTGAAAAAGAAAGCCGATTGGGCTATTCGT 173451 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | || | || | |||||| ||||||||| | |||||||| || || Sbjct 173452 TGGATGAACAAAAAAA---CACCATTTGCTGAACGATTAGTTGCATTTGCATGTGTTGAA 173508 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 ||| | ||||| |||||||| ||||| |||| |||||||| ||||||| | ||| Sbjct 173509 GGTATCTTTTTTAGTGGATCATTTGCATCAATTTTTTGGTTACGTGAACGTGGTGTGATG 173568 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 || ||| | || || |||||||| || || Sbjct 173569 CCTGGTTTAACATTTAGCAATGAATTAAT 173597 >seq18856 Length=423 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || ||||||||||| ||| |||| ||||| |||||| |||||||| | | Sbjct 416 TTATTCAATGCCATTTCAACGTTACCATATGTGAAAAAGAAAGCCGATTGGGCTATTCGT 357 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | || | || | |||||| ||||||||| | |||| ||| || || Sbjct 356 TGGATGAACAAAAAAA---CACCATTTGCTGAACGATTAGTTGCATCTGCATGTGTTGAA 300 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 ||| | ||||| |||||||| ||||| |||| |||||||| ||||||| | ||| Sbjct 299 GGTATCTTTTT-AGTGGATCATTTGCATCAATTTTTTGGTTACGTGAACGTGGTGTGATG 241 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 || ||| | || || |||||||| || || Sbjct 240 CCTGGTTTAACATTTAGCAATGAATTAAT 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397392757864880