Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alatina_20alata_20[genbank_20GCA_5F000260875.1_202012-05-01] 16,094 sequences; 1,544,153,083 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq16080 104 4e-20 seq1223 95.1 2e-17 seq9172 75.2 2e-11 >seq16080 Length=58390 Score = 104 bits (114), Expect = 4e-20 Identities = 99/123 (80%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| || ||| |||| || |||| ||| | | Sbjct 25484 GTACGAGAGGAACCGCAGA-TTCAGAC-AACTGGCACTTGCA-CTTACTGAAAAGGTAAT 25540 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| || | Sbjct 25541 GGTGCGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 25600 Query 121 GAA 123 ||| Sbjct 25601 GAA 25603 >seq1223 Length=647266 Score = 95.1 bits (104), Expect = 2e-17 Identities = 97/123 (79%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| || ||| |||| | |||| || | | Sbjct 635328 GTACGAGAGGAACCGCAGA-TTCAGAC-AACTGGCACTTGCACTTACCTGAAAAGAAA-T 635272 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| || | Sbjct 635271 GGTGCGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTA 635212 Query 121 GAA 123 ||| Sbjct 635211 GAA 635209 >seq9172 Length=988169 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 331755 GAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCC 331707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819072278016