Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq12859 86.0 3e-15 seq13326 80.6 1e-13 seq12457 80.6 1e-13 seq11450 80.6 1e-13 seq2429 80.6 1e-13 >seq12859 Length=1003 Score = 86.0 bits (94), Expect = 3e-15 Identities = 91/118 (77%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTG-ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 |||||||||| || | ||||||| |||||||| ||||| | || || | Sbjct 372 GAACCCAAAGGCTCGGGATTTCTCCACGGGTGCCGACGGAGTCGTACCCG--ACGTCCGC 315 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 314 CGATCCCCGGCCGGCATCGTTTACGGTTGGGACTACGACGGTATCTGATCGTCTTCGA 257 >seq13326 Length=848 Score = 80.6 bits (88), Expect = 1e-13 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTG-ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| || || | ||||||| |||||||| ||||| | || || | Sbjct 138 GAACCCAGAGGCTCGGGATTTCTCCACGGGTGCCGACGGAGTCGTACCCG--ACGTCCGC 195 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 196 CGATCCCCGGCCGGCATCGTTTACGGTTGGGACTACGACGGTATCTGATCGTCTTCGA 253 >seq12457 Length=1084 Score = 80.6 bits (88), Expect = 1e-13 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTG-ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| || || | ||||||| |||||||| ||||| | || || | Sbjct 671 GAACCCAGAGGCTCGGGATTTCTCCACGGGTGCCGACGGAGTCGTACCCG--ACGTCCGC 728 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 729 CGATCCCCGGCCGGCATCGTTTACGGTTGGGACTACGACGGTATCTGATCGTCTTCGA 786 >seq11450 Length=1238 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 27 CCGATCCCCGGCCGGCATCGTTTACGGTTGGGACTACGACGGTATCTGATCGTCTTCGA 85 >seq2429 Length=8360 Score = 80.6 bits (88), Expect = 1e-13 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTG-ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| || || | ||||||| |||||||| ||||| | || || | Sbjct 7612 GAACCCAGAGGCTCGGGATTTCTCCACGGGTGCCGACGGAGTCGTACCCG--ACGTCCGC 7669 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| | |||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 7670 CGATCCCCGGCCGGCATCGTTTACGGTTGGGACTACGACGGTATCTGATCGTCTTCGA 7727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278365031220