Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq11450 241 2e-61 seq13326 239 8e-61 seq12457 239 8e-61 seq2429 239 8e-61 seq12859 237 3e-60 seq13228 122 2e-25 >seq11450 Length=1238 Score = 241 bits (266), Expect = 2e-61 Identities = 237/301 (79%), Gaps = 5/301 (2%) Strand=Plus/Minus Query 22 TCCTTCTGGGGATCCGCA--TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACT 79 || |||| |||| || | ||| ||| |||| | | | |||| | |||| |||||| Sbjct 386 TCTTTCTCGGGAGCCCCGGCTGCTCTTGACTGAGCGGTCGGGGGTTTCGGGACGTTTACT 327 Query 80 TTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAA 137 ||||| |||||||||||||| ||||||||| | ||| |||||| |||||||||||||| Sbjct 326 TTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTAGCATGGAATAA 267 Query 138 TAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGG 197 | ||||||| | || ||||||||||||||| |||| || || ||| | ||||| Sbjct 266 TGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCAGTCATGGTCGATAGG 207 Query 198 GATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGAC 257 || ||| ||||| | ||||||| ||||||||||||||||||| |||||| |||||| Sbjct 206 GACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGATTTGCGGAAGAC 147 Query 258 TAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGG 317 | | ||||||||||| || |||||||||||||||||||||| ||||||||||| ||| Sbjct 146 GAGCGACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGG 88 Query 318 G 318 | Sbjct 87 G 87 >seq13326 Length=848 Score = 239 bits (264), Expect = 8e-61 Identities = 224/281 (80%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| | | | |||| | |||| ||||||||||| |||||||||||||| Sbjct 534 TGCTCTTGACTGAGCGGTCGGGGGTTTCGGGACGTTTACTTTGAACAAATTAGAGTGTTC 475 Query 100 AAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||| | ||| |||||| ||||||||||||||| ||||||| | || | Sbjct 474 CAAGCAGGCCGGTCGCTTTGAATACGTTAGCATGGAATAATGGAATAGGGCCGCTCGTCC 415 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| |||| || || ||| | ||||||| ||| ||||| | ||| Sbjct 414 TATTTTGTTGGTTTTCGGGACGGCAGTCATGGTCGATAGGGACAGTTGGGGGCATTCGTA 355 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 |||| ||||||||||||||||||| |||||| |||||| | | ||||||||||| || Sbjct 354 TTCAGTTGTCAGAGGTGAAATTCTCGGATTTGCGGAAGACGAGCGACTGCGAAAGCATTT 295 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| ||||||||||| |||| Sbjct 294 GCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 255 >seq12457 Length=1084 Score = 239 bits (264), Expect = 8e-61 Identities = 224/281 (80%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| | | | |||| | |||| ||||||||||| |||||||||||||| Sbjct 1067 TGCTCTTGACTGAGCGGTCGGGGGTTTCGGGACGTTTACTTTGAACAAATTAGAGTGTTC 1008 Query 100 AAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||| | ||| |||||| ||||||||||||||| ||||||| | || | Sbjct 1007 CAAGCAGGCCGGTCGCTTTGAATACGTTAGCATGGAATAATGGAATAGGGCCGCTCGTCC 948 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| |||| || || ||| | ||||||| ||| ||||| | ||| Sbjct 947 TATTTTGTTGGTTTTCGGGACGGCAGTCATGGTCGATAGGGACAGTTGGGGGCATTCGTA 888 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 |||| ||||||||||||||||||| |||||| |||||| | | ||||||||||| || Sbjct 887 TTCAGTTGTCAGAGGTGAAATTCTCGGATTTGCGGAAGACGAGCGACTGCGAAAGCATTT 828 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| ||||||||||| |||| Sbjct 827 GCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 788 >seq2429 Length=8360 Score = 239 bits (264), Expect = 8e-61 Identities = 224/281 (80%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| | | | |||| | |||| ||||||||||| |||||||||||||| Sbjct 8008 TGCTCTTGACTGAGCGGTCGGGGGTTTCGGGACGTTTACTTTGAACAAATTAGAGTGTTC 7949 Query 100 AAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||| | ||| |||||| ||||||||||||||| ||||||| | || | Sbjct 7948 CAAGCAGGCCGGTCGCTTTGAATACGTTAGCATGGAATAATGGAATAGGGCCGCTCGTCC 7889 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTA 217 |||||||||||||| |||| || || ||| | ||||||| ||| ||||| | ||| Sbjct 7888 TATTTTGTTGGTTTTCGGGACGGCAGTCATGGTCGATAGGGACAGTTGGGGGCATTCGTA 7829 Query 218 TTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTC 277 |||| ||||||||||||||||||| |||||| |||||| | | ||||||||||| || Sbjct 7828 TTCAGTTGTCAGAGGTGAAATTCTCGGATTTGCGGAAGACGAGCGACTGCGAAAGCATTT 7769 Query 278 ACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||||||||||||||||| ||||||||||| |||| Sbjct 7768 GCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTGGGGG 7729 >seq12859 Length=1003 Score = 237 bits (262), Expect = 3e-60 Identities = 206/252 (82%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTC-GAATACATTA 126 |||| ||||||||||| |||||||||||||| ||||||||| | ||| |||||| ||| Sbjct 5 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 64 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAA 186 |||||||||||| ||||||| | || ||||||||||||||| |||| || || | Sbjct 65 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCAGTCA 124 Query 187 TGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGAT 246 || | ||||||| ||| ||||| | ||||||| ||||||||||||||||||| |||| Sbjct 125 TGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGAT 184 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 || |||||| | | ||||||||||| || |||||||||||||||||||||| |||| Sbjct 185 TTGCGGAAGACGAGCGACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAAC 243 Query 307 GAAAGTTAGGGG 318 ||||||| |||| Sbjct 244 GAAAGTTGGGGG 255 >seq13228 Length=890 Score = 122 bits (134), Expect = 2e-25 Identities = 128/166 (77%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| | | | |||| | |||| ||||||||||| |||||||||||||| Sbjct 724 TGCTCTTGACTGAGCGGTCGGGGGTTTCGGGACGTTTACTTTGAACAAATTAGAGTGTTC 783 Query 100 AAAGCAGGCCTTT-GCTC-GAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 ||||||||| | ||| |||||| ||||||||||||||| ||||||| | || | Sbjct 784 CAAGCAGGCCGGTCGCTTTGAATACGTTAGCATGGAATAATGGAATAGGGCCGCTCGTCC 843 Query 158 TATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGT 203 |||||||||||||| |||| || || ||| | ||||||| ||| Sbjct 844 TATTTTGTTGGTTTTCGGGACGGCAGTCATGGTCGATAGGGACAGT 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915077381504