Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq5239 105 7e-21 >seq5239 Length=2428 Score = 105 bits (116), Expect = 7e-21 Identities = 145/199 (73%), Gaps = 9/199 (5%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTC-GTCATCTAAA 59 |||||||||||||||| | |||||||||||||||||||||||||||||| |||| | | Sbjct 243 TTACCTGAAGCTTAGAGGATTTTCTTGGAAGCATGGCATCAACCACTTCGGTCAACCCGA 184 Query 60 AG--ATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCT---AAGATTCCA 114 || | | |||| ||||| | || || |||||||| ||| || || Sbjct 183 AGGAAGACCTCGACATCACGCCTTGGGATTGCCGCACCGGATTTTCCTGGAGCGACTC-- 126 Query 115 GCCTACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCC 174 ||| | ||| ||| ||||| || || || | ||||||||||||||||||| | || Sbjct 125 -CCTTCACGCTTGAACCGGGACATCCGACACCCGGATGGCCTAGCCTTCTCCGTCTCCCC 67 Query 175 ATCGCATTAACCAGAAGTA 193 |||||| ||| ||| ||| Sbjct 66 ATCGCAGTAATAAGAGGTA 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518332715244