Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq5239 174 2e-41 >seq5239 Length=2428 Score = 174 bits (192), Expect = 2e-41 Identities = 188/246 (76%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| || ||||| || ||| | | || ||| Sbjct 504 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACTTCCTCTTTC-GAGTTTGCAGA 446 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC-- 119 | ||||||||||||||||||||||| || || || ||||| || ||| | |||| Sbjct 445 GTGCTGTGTTTTTAGTAAACAGTCGCAGCCACCTGGTCACTGCGGCCCCCATCGGCTCCG 386 Query 120 --AACACGTCG-TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | || ||| ||||||| || ||||| ||||||||||||||||||| || ||||||| Sbjct 385 AGAGCAAGTCTCTTCACCAACAAAGGCACACCTTCTCCCGAAGTTACGGTGCTATTTTGC 326 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 | | |||||| || | |||| | | | |||||| | |||||| |||| |||||||||| Sbjct 325 CTAGTTCCTTCACGAGGGTTCTCTCAAGCGCCTTGGGATTCTCACCCTGCCCACCTGTGT 266 Query 237 CGGTTT 242 |||||| Sbjct 265 CGGTTT 260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694309871654