Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12859 188 1e-45 seq12457 188 1e-45 seq2429 188 1e-45 seq2770 96.9 6e-18 >seq12859 Length=1003 Score = 188 bits (208), Expect = 1e-45 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 616 CTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATCAACCAGACAAATCACTCCACCA 557 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 556 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCGATCTGTC 500 Score = 143 bits (158), Expect = 4e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 823 CTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 764 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAA-GCCAATAGTCCCTCTAAGAAG 115 |||||||||||||| | ||| ||||| || ||| | |||||||||||||| Sbjct 763 CTGTTATTGCCTCAGTCCTCCCCCGGCTGAAACGCCGAGTGTCCCTCTAAGAAG 710 >seq12457 Length=1084 Score = 188 bits (208), Expect = 1e-45 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 427 CTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATCAACCAGACAAATCACTCCACCA 486 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 487 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCGATCTGTC 543 Score = 143 bits (158), Expect = 4e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 CTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 279 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAA-GCCAATAGTCCCTCTAAGAAG 115 |||||||||||||| | ||| ||||| || ||| | |||||||||||||| Sbjct 280 CTGTTATTGCCTCAGTCCTCCCCCGGCTGAAACGCCGAGTGTCCCTCTAAGAAG 333 >seq2429 Length=8360 Score = 188 bits (208), Expect = 1e-45 Identities = 112/117 (96%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 7368 CTAGTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATCAACCAGACAAATCACTCCACCA 7427 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 7428 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCGATCTGTC 7484 Score = 143 bits (158), Expect = 4e-32 Identities = 101/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7161 CTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 7220 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAA-GCCAATAGTCCCTCTAAGAAG 115 |||||||||||||| | ||| ||||| || ||| | |||||||||||||| Sbjct 7221 CTGTTATTGCCTCAGTCCTCCCCCGGCTGAAACGCCGAGTGTCCCTCTAAGAAG 7274 >seq2770 Length=7538 Score = 96.9 bits (106), Expect = 6e-18 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||| |||| ||||| |||||| |||||||| ||||| ||||| | | |||||||||| Sbjct 5466 AGGCCTCGCCCGTTAGCGGAATAAACCAGACTTTTCACTTCACCAGCCACGAACGGCCAT 5407 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||||||||||||| ||||| ||||||| || Sbjct 5406 GCACCACCACCCATCGAATCGAGAAAGAACT 5376 Score = 87.8 bits (96), Expect = 3e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| Sbjct 5658 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACTGACCTGTTATTG 5603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796696580838