Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq5239 201 2e-49 >seq5239 Length=2428 Score = 201 bits (222), Expect = 2e-49 Identities = 182/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 874 GGGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCCAAAGAGTAACGGAGGA 933 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 || | ||| | ||||||| || ||||| | || |||| ||||||||||||| | Sbjct 934 GCGCGAAGGTGCCCTCAGTGCGGTCGGAAATCGCACGGTGAGTGTAAAGGCAAAAGGGCG 993 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||||| || |||||| |||||| |||||| || |||| |||||||| || Sbjct 994 CTTGACTGCGAGACATACAAGTCGAGCAGGTGCGAAAGCAGGCCTTAGTGATCCGGTGGC 1053 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 1054 TCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 1102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982268378048