Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq13326 91.5 2e-16 seq13228 91.5 2e-16 seq12859 91.5 2e-16 seq12457 91.5 2e-16 seq11450 91.5 2e-16 seq2429 91.5 2e-16 >seq13326 Length=848 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCAC-GTCCTATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||| ||||| | | ||||||| ||||||||||||||| |||||| | Sbjct 401 AAACCAACAAAATA-GGACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 459 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 460 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 505 >seq13228 Length=890 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||||| ||| || || ||||| ||||||||||||||| |||||| | Sbjct 857 AAACCAACAAAATAGG-ACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 799 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 798 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 753 >seq12859 Length=1003 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCC-TATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||||| ||| || || ||||| ||||||||||||||| |||||| | Sbjct 109 AAACCAACAAAATAGG-ACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 51 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 50 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 5 >seq12457 Length=1084 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCAC-GTCCTATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||| ||||| | | ||||||| ||||||||||||||| |||||| | Sbjct 934 AAACCAACAAAATA-GGACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 992 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 993 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 1038 >seq11450 Length=1238 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCAC-GTCCTATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||| ||||| | | ||||||| ||||||||||||||| |||||| | Sbjct 233 AAACCAACAAAATA-GGACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 291 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 292 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 337 >seq2429 Length=8360 Score = 91.5 bits (100), Expect = 2e-16 Identities = 87/106 (82%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCAC-GTCCTATTCTATTATTCCATGCTAATGTATTC-GGG 67 |||||||||||||| ||||| | | ||||||| ||||||||||||||| |||||| | Sbjct 7875 AAACCAACAAAATA-GGACGAGCGGCCCTATTCCATTATTCCATGCTAACGTATTCAAAG 7933 Query 68 CG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 || |||||||| |||||||||||||| |||| ||||| |||| Sbjct 7934 CGACCGGCCTGCTTGGAACACTCTAATTTGTTCAAAGTAAACGTCC 7979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595122747132