Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq930 140 8e-31 >seq930 Length=26019 Score = 140 bits (154), Expect = 8e-31 Identities = 279/406 (69%), Gaps = 18/406 (4%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||| || ||||| || |||| |||||| || || || || |||||||||||| Sbjct 19536 CGATGGTCAATAAATCGCCCCCGACCTCGGTCCAAGCAAGACCGGTCACCTGACCGACTC 19595 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAG-- 118 ||| || || ||| | ||| ||| |||||||||| |||||| | | ||| || Sbjct 19596 GATTCTCCTCCTCCTTGCGCCCGAAGCGATATTTGCGCACCCCGAGGTATTCCTCGAGAT 19655 Query 119 --GGAG--TCGGCCGTGACCTTCACCGAGAAGCGTTTT-TCCAGCG----CATGTTCCTT 169 | || ||| | || |||| | | ||| ||| || | | ||||| Sbjct 19656 TCGAAGGCTCGACGAGGATCTTCTCTTT----CTTTTCCTCCCCCGAGACCTTCTTCCT- 19710 Query 170 GACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCG 229 |||| ||||||||||||| ||||||| ||| || | || ||||| ||||| ||||| Sbjct 19711 GACCACCTTGCGGCAGATACGGGCGATCTCGCGATCGACTCCGCGCACCCCGGCCTCGCG 19770 Query 230 GGTGTAGTAGCGGACGATGTCGCGGATCG-TGCCGACTTCAAATTCGATCTCGCCCTTCT 288 |||||||| ||| ||||| |||||||||| |||| | | |||| |||| || | Sbjct 19771 GGTGTAGTGGCGCACGATATCGCGGATCGCCTCCGAGGAGAGA-TCGAGCTCGTTCTCTT 19829 Query 289 TCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCT 348 |||| || || |||| ||| ||| || |||||| |||| |||| Sbjct 19830 TCAGCCCCGCATCCTCCTTCTGACGCGGCAGGAGATAGCGCTCGGCGATATTGAGTTTCT 19889 Query 349 CGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||| ||||| || |||| || || ||||||||||| || ||||| Sbjct 19890 CGTCCTCGGTATAGCCCGAAAGACGGATCACTTCCATGCGATCCAG 19935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158244797568