Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq5356 111 4e-22 >seq5356 Length=2372 Score = 111 bits (122), Expect = 4e-22 Identities = 180/257 (70%), Gaps = 9/257 (4%) Strand=Plus/Minus Query 169 CGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTG 228 || ||||||||||||| || ||||| |||| ||| || ||| | |||||||| || | Sbjct 2372 CGGTGAAGTCGGCGATGACCCCGTCCTTCAACGGGCGGATGACTTTGATATTGCCCGGGG 2313 Query 229 TACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTT-----CTGATT 283 | || || | ||| | ||||| || |||||||||| ||| | | | || Sbjct 2312 TGCGCCCCAACATCCCTTTGGCTTCTTTGCCGACGGCGGCGATCCGGTCGCTGCCCGACG 2253 Query 284 -ACCATGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCA 342 ||| ||| || | |||||| ||||| ||||| || ||||| || || || || Sbjct 2252 GACCCTGG---CGCACGGCCACCACCGAGGGCTCGTTGAGGACAATCCCCTTGTCCCGAG 2196 Query 343 CGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCAC 402 || | || |||||||||||||| |||| || ||||| || ||| | ||||||| ||| | Sbjct 2195 CGAAGATGAGGGTGTTGGCAGTCCCCAAATCGATGGAGAGGTCGTTCGAAAACAGGCCCC 2136 Query 403 GCAGTTTCTTGAACATG 419 |||| ||| | |||| Sbjct 2135 GCAGGCGCTTTAGCATG 2119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353418644672