Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq13326 140 3e-31 seq12859 140 3e-31 seq12457 140 3e-31 seq11450 140 3e-31 seq2429 140 3e-31 seq13228 95.1 1e-17 >seq13326 Length=848 Score = 140 bits (154), Expect = 3e-31 Identities = 143/183 (78%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | ||| |||||| ||| Sbjct 505 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 446 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| |||| || || Sbjct 445 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCA-GTC 387 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| | ||| ||| ||| ||||| | ||||||| |||||| |||||||||||| ||| Sbjct 386 ATGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGA 327 Query 186 TTT 188 ||| Sbjct 326 TTT 324 >seq12859 Length=1003 Score = 140 bits (154), Expect = 3e-31 Identities = 143/183 (78%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGC-TCGAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | || | |||||| ||| Sbjct 5 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 64 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| | || || | || Sbjct 65 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTT-TCGGGACGGCAGTC 123 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| | ||| ||| ||| ||||| | ||||||| |||||| |||||||||||| ||| Sbjct 124 ATGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGA 183 Query 186 TTT 188 ||| Sbjct 184 TTT 186 >seq12457 Length=1084 Score = 140 bits (154), Expect = 3e-31 Identities = 143/183 (78%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | ||| |||||| ||| Sbjct 1038 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 979 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| |||| || || Sbjct 978 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCA-GTC 920 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| | ||| ||| ||| ||||| | ||||||| |||||| |||||||||||| ||| Sbjct 919 ATGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGA 860 Query 186 TTT 188 ||| Sbjct 859 TTT 857 >seq11450 Length=1238 Score = 140 bits (154), Expect = 3e-31 Identities = 143/183 (78%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | ||| |||||| ||| Sbjct 337 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 278 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| |||| || || Sbjct 277 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCA-GTC 219 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| | ||| ||| ||| ||||| | ||||||| |||||| |||||||||||| ||| Sbjct 218 ATGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGA 159 Query 186 TTT 188 ||| Sbjct 158 TTT 156 >seq2429 Length=8360 Score = 140 bits (154), Expect = 3e-31 Identities = 143/183 (78%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | ||| |||||| ||| Sbjct 7979 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 7920 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| |||| || || Sbjct 7919 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTTTCGGGACGGCA-GTC 7861 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| | ||| ||| ||| ||||| | ||||||| |||||| |||||||||||| ||| Sbjct 7860 ATGGTCGATAGGGACAGTTGGGGGCATTCGTATTCAGTTGTCAGAGGTGAAATTCTCGGA 7801 Query 186 TTT 188 ||| Sbjct 7800 TTT 7798 >seq13228 Length=890 Score = 95.1 bits (104), Expect = 1e-17 Identities = 106/138 (77%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGC-TCGAATACATTA 65 |||| ||||||||||| ||||||||| |||| ||||||||| | || | |||||| ||| Sbjct 753 GGACGTTTACTTTGAACAAATTAGAGTGTTCCAAGCAGGCCGGTCGCTTTGAATACGTTA 812 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125 ||||||||||| ||||||| | || ||||||||| ||||| | || || | || Sbjct 813 GCATGGAATAATGGAATAGGGCCGCTCGTCCTATTTTGTTGGTTT-TCGGGACGGCAGTC 871 Query 126 ATGATAAATACGGATAGT 143 ||| | ||| ||| ||| Sbjct 872 ATGGTCGATAGGGACAGT 889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511933545920