Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5239 284 2e-74 >seq5239 Length=2428 Score = 284 bits (314), Expect = 2e-74 Identities = 226/272 (83%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || ||||||| |||||||||| |||||| ||||||||||| |||| ||| ||| || Sbjct 1424 GGGGGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCGTACTTGGCTACCCGGCA 1365 Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123 |||| |||| ||||| || |||||||||| ||||| ||||||||||||||||| Sbjct 1364 ATGCCACTGGCGTGACAACCGGAACACCAGAGGTACGTCCACTCCGGTCCTCTCGTACTA 1305 Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA 183 || ||||||| |||| | ||| ||||||||| | |||||||||||||||||||| ||| Sbjct 1304 AGAGCAGCTCCCCTCATGTCTCCAACGCCCACGGCAGATAGGGACCGAACTGTCTCACGA 1245 Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243 |||||| |||||||||||||| || |||||| ||||||||||| ||||||||||||| Sbjct 1244 CGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTG 1185 Query 244 CTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||||||||||| || |||||||||||| Sbjct 1184 CTACAGCCCCAGGATGTGATGAGCCGACATCG 1153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780698657528