Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq5239 389 1e-105 >seq5239 Length=2428 Score = 389 bits (430), Expect = 1e-105 Identities = 428/566 (76%), Gaps = 14/566 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||||||||||||| ||||| ||| ||||||||||| |||| || Sbjct 1018 TCGACTTGTATGTCTCGCAGTCAAGCGCCCTTTTGCCTTTACACTCACCGTGCGATTTCC 959 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| ||||||| ||||| | || |||||||||| ||||||||| | ||||||||| Sbjct 958 GACCGCACTGAGGGCACCTTCGCGCTCCTCCGTTACTCTTTGGGAGGAGA-CCGCCCCAG 900 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| |||||||||| |||| ||| | ||||| |||||| ||| Sbjct 899 TCAAACTACCCACCACACACTGTCCCCGACCCGGATAACGGGCCTGGGTTAGGCCTCCG- 841 Query 181 TACGGT--CAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | | | ||| |||||||||||| | | |||||| || ||| |||| ||| || | Sbjct 840 -AAGATACCAGGGTGGTATTTCAAGGATGGCTCCACGACAACTGGCGTCATCGCTTCGAA 782 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | |||||||||||||||||||| | | || | || | ||| | |||| ||||| Sbjct 781 GCCTCCCACCTATCCTACACAAGCATATTCAAAGGTCAGTGTGAAGTTGTAGTAAAGGTT 722 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| ||||||| | | ||||||| || | | ||||||||| Sbjct 721 CACGGGGTCTTTCCGTCTTGCCGCGGGTACGCTGCATCTTCACAGCGAGTTCAATTTCAC 662 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | | | || |||||||| || |||||||||||||||||||||||||||||||| Sbjct 661 TGAGTCCCTCGTGGAGACAGCGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 602 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||| Sbjct 601 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCT 542 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || || | || || | | | | ||| || | |||||||||| |||| Sbjct 541 TCGATCAAGAGCTTCGCCC--------GAGGGCTGACCCCATCAATTAACCTTCCGGCAC 490 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 489 CGGGCAGGCGTCACACCCTATACTTC 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702171912448