Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq11450 518 1e-144 seq13228 466 5e-129 seq2770 215 2e-53 seq2429 149 2e-33 seq13326 75.2 3e-11 >seq11450 Length=1238 Score = 518 bits (574), Expect = 1e-144 Identities = 431/526 (82%), Gaps = 23/526 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | |||| | | | || | || ||||| |||||||||||| Sbjct 597 GTACTCATTCCAATTGCCGGACCTCTATGGGACCGGCATTGTTATTTCTTGTCACTACCT 656 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 716 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 717 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCGACCATGGTA 776 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||| || |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 777 GCCCAATACGCTACCATCGAAAGTTGATAGGGCAGAAACTTGAATGAACCATCGCCGGCG 836 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----------A 289 | ||||| |||||||| ||||| |||||||||| || | ||| Sbjct 837 CGGAGGCCGAGCGATTCGAACAGTTACCATGAATCACCCGAGAACGCCGGCCGGGCCGTG 896 Query 290 AGG--------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG---AAGTCGGGGT 338 ||| | || |||||| ||||||||||||| |||| ||| ||||||| Sbjct 897 AGGCACCGACCGGGTCGGTTTTGGATCTAATAAATACGTCCCTCCCGTGACAGTCGGGAC 956 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 ||| ||||||||||||||||||||||||||||||||||| |||| || |||||| Sbjct 957 CTTTTGCATGTATTAGCTCTAGAATTACCACGGTTATCCACGTAGCGGAACACCATCAAA 1016 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||||| |||||||||||||||||||||||||||| |||| | | | | |||||||| Sbjct 1017 TAAACTATAACTGATTTAATGAGCCATTCGCAGTCTCAC-GATTCAAGCGTTTATACTTG 1075 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1076 CACATGCATGGCTTAGTCTTTGAGACAAGCATATGACTACTGGCAG 1121 >seq13228 Length=890 Score = 466 bits (516), Expect = 5e-129 Identities = 400/494 (81%), Gaps = 23/494 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | |||| | | | || | || ||||| |||||||||||| Sbjct 493 GTACTCATTCCAATTGCCGGACCTCGATGGGACCGGCATTGTTATTTCTTGTCACTACCT 434 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 433 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 374 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| Sbjct 373 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTGCGACCATGGTA 314 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||| || |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 313 GCCCAATACGCTACCATCGAAAGTTGATAGGGCAGAAACTTGAATGAACCATCGCCGGCG 254 Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----------A 289 | ||||| |||||||| ||||| |||||||||| || | ||| Sbjct 253 CGGAGGCCGAGCGATTCGAACAGTTACCATGAATCACCCGAGAACGCCGGCCGGGCCGTG 194 Query 290 AGG--------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG---AAGTCGGGGT 338 ||| | || |||||| ||||||||||||| |||| ||| ||||||| Sbjct 193 AGGCACCGACCGGGTCGGTTTTGGATCTAATAAATACGTCCCTCCCGTGACAGTCGGGAC 134 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 ||| ||||||||||||||||||||||||||||||||||| |||| || |||||| Sbjct 133 CTTTTGCATGTATTAGCTCTAGAATTACCACGGTTATCCACGTAGCGGAACACCATCAAA 74 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 ||||| |||||||||||||||||||||||||||| |||| | | | | |||||||| Sbjct 73 TAAACTATAACTGATTTAATGAGCCATTCGCAGTCTCAC-GATTCAAGCGTTTATACTTG 15 Query 459 GACATGCATGGCTT 472 ||||||||||||| Sbjct 14 CACATGCATGGCTT 1 >seq2770 Length=7538 Score = 215 bits (238), Expect = 2e-53 Identities = 152/174 (87%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 4514 TATTTTTCGTCACTACCTCCCCGTGTCGGGATTGGGTAAGTTGCGCGCCTGCTGCCCTCC 4455 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 4454 TTGGAGGTGGTAGCCGTTTCGCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 4395 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 ||||| | ||| |||||||| | || ||||||| | ||||| || |||| Sbjct 4394 CCCGTCAACACCGTGGTAGGCAGGTCGCCGACCATCGCCAATTGATGGGACAGA 4341 Score = 95.1 bits (104), Expect = 4e-17 Identities = 129/178 (72%), Gaps = 19/178 (11%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTAC------TATCAA 397 |||||||||||||||||||||||||| ||||||||| || | | | || | | Sbjct 4154 GCATGTATTAGCTCTAGAATTACCACAGTTATCCAT-TAAAACCGACCCGCTTTTAGCCA 4096 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCA---------CTGTATAGATT- 447 | ||| || |||| | |||||||| ||||||||||| | | | || Sbjct 4095 AGGAACCTTATCTGACT-AATGAGCCGTTCGCAGTTTCGGCTCGCTCCCCGAAAGGAACA 4037 Query 448 -GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || | |||||||| |||||||||||| ||||||||||||||||||| |||||||| Sbjct 4036 AGCCTGAACTTAGACTTGCATGGCTTAAGCTTTGAGACAAGCATATGATCACTGGCAG 3979 >seq2429 Length=8360 Score = 149 bits (164), Expect = 2e-33 Identities = 106/122 (87%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | |||| | | | || | || ||||| |||||||||||| Sbjct 8239 GTACTCATTCCAATTGCCGGACCTCTATGGGACCGGCATTGTTATTTCTTGTCACTACCT 8298 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8299 CCCCGAGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 8358 Query 121 TC 122 || Sbjct 8359 TC 8360 >seq13326 Length=848 Score = 75.2 bits (82), Expect = 3e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||| | |||| | | | || | || ||||| |||||||||||| Sbjct 765 GTTCTCATTCCAATTGCCGGACCTCGATGGGACCGGCATTGTTATTTCTTGTCACTACCT 824 Query 61 CCCCGTGTCGGGATTGGGTAATTT 84 ||||| |||||||||||||||||| Sbjct 825 CCCCGAGTCGGGATTGGGTAATTT 848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510197636608