Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphimedon_20queenslandica_20[refseq_20GCF_5F000090795.1_202010-05- 28] 13,398 sequences; 166,699,561 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq97 107 2e-18 >seq97 Length=262405 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 65726 GCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 || ||| ||||||| |||||||| || ||||| || || | ||||| || | || Sbjct 111424 GCTGCATAATAAATTGTCTCGAATATCATCCGATTGAGCTCCTGAGCCTCTTCACAATCA 111365 Query 65786 TACGGCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 ||| ||||| ||| |||| ||| ||||| || |||||||| || |||||||| ||||| Sbjct 111364 AACGA-ATACCTCATTAGGATAAAGGTGTCAGCGAGACCTTGTACCCCAATACCAATGGG 111306 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 |||||| || | || || | ||||||||||| ||||| || ||||| || || || Sbjct 111305 ACGATGGCGGAGGTTTGATGTCCGAGCCTCAGGTACTGGGTAATAGTTGATGTCAATGAT 111246 Query 65905 GCGATTCAAATTGCGTGT 65922 | || | ||||| || Sbjct 111245 CCTGTTGAGGTTGCGAGT 111228 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 65157 CATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACATGCATATTCAACG 65216 |||| |||||||| |||| | ||| || | || | ||| ||| || ||||| || Sbjct 114077 CATAAAAATGCATGGATGTCATTTTCCCAAAGTTAGTCTCCCCCATGTGAATATTGAAGC 114018 Query 65217 ACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGA--CGTC- 65273 |||||||||||| |||||| |||||||| |||||||||| ||||| || | || Sbjct 114017 TCTGACTCTGATCAATGTAAGCTCCACGATCAGCAGCCATGT---TGATAAGAGTCTTCT 113961 Query 65274 CCGATATCTCCCAGACGGTCTTGTACAG 65301 ||||||||||| || |||||||| || Sbjct 113960 GAGATATCTCCCAAACCGTCTTGTATAG 113933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397503081866720