Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2100 87.8 1e-15 seq885 87.8 1e-15 seq695 87.8 1e-15 >seq2100 Length=41576 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 2075 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 2016 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 2015 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 1960 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 18159 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 18100 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 18099 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 18044 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 21493 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 21434 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 21433 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 21378 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 28780 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 28721 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 28720 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 28665 >seq885 Length=324208 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 25093 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 25152 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 25153 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 25208 >seq695 Length=442779 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||| |||| || ||| |||| |||||| | ||| | | Sbjct 32751 GAACCCAAAAACTTTGGTTTCCCGGAAGCTGCCCGCAGAGTCATCAAAGCAACTCCTGCG 32810 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||| ||||| ||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct 32811 GATCGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCG 32866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278388693480