Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2100 392 6e-107 seq885 392 6e-107 seq695 392 6e-107 seq514 131 3e-28 seq275 73.4 7e-11 >seq2100 Length=41576 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 7415 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 7356 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7355 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 7296 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7295 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 7236 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 7235 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 7176 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 7175 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 7122 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 26824 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 26765 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 26764 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 26705 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26704 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 26645 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 26644 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 26585 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 26584 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 26531 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 34114 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 34055 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 34054 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 33995 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 33994 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 33935 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 33934 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 33875 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 33874 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 33821 >seq885 Length=324208 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 19767 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 19826 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 19827 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 19886 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 19887 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 19946 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 19947 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 20006 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 20007 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 20060 >seq695 Length=442779 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 21055 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 21114 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 21115 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 21174 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21175 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 21234 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 21235 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 21294 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 21295 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 21348 Score = 392 bits (434), Expect = 6e-107 Identities = 264/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 27413 TACTGAGCAGGATTACCGTAGCAACGACTTGTCATCAGTAGGGTAAAACTAACCTGTCTC 27472 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 27473 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 27532 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 27533 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 27592 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 27593 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCT 27652 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 27653 TAAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 27706 >seq514 Length=572913 Score = 131 bits (144), Expect = 3e-28 Identities = 77/80 (96%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 138857 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCATTTATCCCTGTGGTA 138798 Query 219 ACTTTTCTGGCACCTCTAGC 238 ||||||||| ||||||| || Sbjct 138797 ACTTTTCTGACACCTCTTGC 138778 >seq275 Length=949130 Score = 73.4 bits (80), Expect = 7e-11 Identities = 66/82 (80%), Gaps = 6/82 (7%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGT-AAAACTAACCTGTCTCATG-----ACGGTCTAAACCCAGCTCACG 83 |||||| || |||| ||||||||||| ||||| | ||||||||||||| ||||||| Sbjct 678862 GTCATCTGTTGGGTGAAAACTAACCTATCTCACGCCACGACGGTCTAAACCCGGCTCACG 678921 Query 84 TTCCCTATTAGTGGGTGAACAA 105 ||||| ||| |||| | |||| Sbjct 678922 TTCCCCGTTAATGGGCGGACAA 678943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854362987392