Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq2100 73.4 8e-11 seq885 73.4 8e-11 seq695 73.4 8e-11 >seq2100 Length=41576 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 6982 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 7041 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 7042 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 7096 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 26391 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 26450 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 26451 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 26505 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 33681 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 33740 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 33741 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 33795 >seq885 Length=324208 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 20200 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 20141 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 20140 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 20086 >seq695 Length=442779 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 21488 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 21429 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 21428 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 21374 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 27846 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 27787 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 27786 TCCCAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 27732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982357442432