Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2100 78.8 6e-13 seq885 78.8 6e-13 seq695 78.8 6e-13 >seq2100 Length=41576 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 2633 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 2576 Query 123 CT 124 || Sbjct 2575 CT 2574 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 18717 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 18660 Query 123 CT 124 || Sbjct 18659 CT 18658 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 22052 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 21995 Query 123 CT 124 || Sbjct 21994 CT 21993 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 29338 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 29281 Query 123 CT 124 || Sbjct 29280 CT 29279 >seq885 Length=324208 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 24535 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 24592 Query 123 CT 124 || Sbjct 24593 CT 24594 >seq695 Length=442779 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||| ||||| ||||||||||| |||||||||||||||||||||||| |||||| || Sbjct 32195 TCAATCGATAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAG 32252 Query 123 CT 124 || Sbjct 32253 CT 32254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300787783760