Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq695 208 1e-51 seq2100 205 2e-50 seq885 205 2e-50 >seq695 Length=442779 Score = 208 bits (230), Expect = 1e-51 Identities = 204/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 32477 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 32420 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 32419 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 32360 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| ||| ||||||| || | | || ||| ||||||| ||||| | | ||| Sbjct 32359 CCT-GGCCCGAAAGTCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCTTG 32301 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 32300 TAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 32241 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 32240 ACGTCCCTGCCCTTTGTA 32223 >seq2100 Length=41576 Score = 205 bits (226), Expect = 2e-50 Identities = 204/259 (79%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 2349 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 2406 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 2407 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 2466 Query 191 CCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || ||||| ||| || ||||| || | | || ||| ||||||| ||||| | | || Sbjct 2467 CCCTGGCCCGAAAGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCTT 2526 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 2527 GTAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 2586 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 2587 TACGTCCCTGCCCTTTGTA 2605 Score = 205 bits (226), Expect = 2e-50 Identities = 204/259 (79%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 18433 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 18490 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 18491 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 18550 Query 191 CCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || ||||| ||| || ||||| || | | || ||| ||||||| ||||| | | || Sbjct 18551 CCCTGGCCCGAAAGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCTT 18610 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 18611 GTAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 18670 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 18671 TACGTCCCTGCCCTTTGTA 18689 Score = 205 bits (226), Expect = 2e-50 Identities = 204/259 (79%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 29054 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 29111 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 29112 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 29171 Query 191 CCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || ||||| ||| || ||||| || | | || ||| ||||||| ||||| | | || Sbjct 29172 CCCTGGCCCGAAAGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCTT 29231 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 29232 GTAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 29291 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 29292 TACGTCCCTGCCCTTTGTA 29310 Score = 203 bits (224), Expect = 6e-50 Identities = 204/260 (78%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 21767 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 21824 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 21825 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 21884 Query 191 CCTTGGCCGGAA--GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 || ||||| ||| || ||||| || | | || ||| ||||||| ||||| | | | Sbjct 21885 CCCTGGCCCGAAAGGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCT 21944 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| || | | | |||||||||| || |||||||||| ||||| ||| |||||||| Sbjct 21945 TGTAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGA 22004 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 22005 TTACGTCCCTGCCCTTTGTA 22024 >seq885 Length=324208 Score = 205 bits (226), Expect = 2e-50 Identities = 204/259 (79%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | |||| |||| || | ||||| |||||||||||||||| Sbjct 24819 CTTCTTAGAGGGACGAGTGGCTTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 24762 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||||||||||||||||||||| || || || | | | Sbjct 24761 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATACCC 24702 Query 191 CCTTGGCCGGAA-GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 || ||||| ||| || ||||| || | | || ||| ||||||| ||||| | | || Sbjct 24701 CCCTGGCCCGAAAGGGCTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCTT 24642 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 | |||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||| Sbjct 24641 GTAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGAT 24582 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 24581 TACGTCCCTGCCCTTTGTA 24563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947158967296