Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aplysia_20californica_20[refseq_20GCF_5F000002075.1_202013-05-15] 4,332 sequences; 927,310,431 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2100 100 5e-19 seq885 100 5e-19 seq695 100 5e-19 seq413 78.8 2e-12 >seq2100 Length=41576 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 7413 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 7470 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7471 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 7524 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 26822 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 26879 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 26880 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 26933 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 34112 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 34169 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 34170 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 34223 >seq885 Length=324208 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 19769 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 19712 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 19711 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 19658 >seq695 Length=442779 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 21057 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 21000 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 20999 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 20946 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| | | || |||| || || | Sbjct 27415 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCACGTGCTTGGCTGATAAGCCAAT 27358 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 27357 GGTGCGAGGCTACCATCTGAGGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 27304 >seq413 Length=716393 Score = 78.8 bits (86), Expect = 2e-12 Identities = 90/116 (78%), Gaps = 5/116 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCG-GCT-GTCTGACCAGGCA 58 |||||||||||||||| | |||||| ||| ||||| || ||| | |||| || || Sbjct 212850 GTACGAGAGGAACCGCAGG-TTCAGAC--ATTTGTTTTCACGTGCTTGGCTGATAAGCCA 212794 Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || | | ||||||||||| ||||||||||||||| ||||||||||| | ||| Sbjct 212793 ATGGTGTAAGGCTACCATCTGAGGGATTATGGCTGAACACCTCTAAGTCACAGTCC 212738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819165621248