Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq9425 102 3e-19 seq77133 84.2 9e-14 seq67875 75.2 5e-11 >seq9425 Length=4502 Score = 102 bits (112), Expect = 3e-19 Identities = 93/117 (79%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTAT----GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||| |||||||||||| || || | ||| || || |||||||||||||||| Sbjct 600 ACCCGAAAAATGGTGAACTATATTTGCTTGGACAGGAAGAGGCAAGAGGAAACTCTGGTG 659 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | |||||||||| || |||||||||||||| | | || |||||||||||| Sbjct 660 GATGTCCGCAGCGGTTGTGACGTGCAAATCGATCAGCCGACCTGAGTATAGGGGCGA 716 >seq77133 Length=1051 Score = 84.2 bits (92), Expect = 9e-14 Identities = 86/112 (77%), Gaps = 4/112 (4%) Strand=Plus/Plus Query 576 AAAGATGGTGAACTAT----GCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 || ||||||||| ||| || | | ||| || |||||||||||| |||||||| | Sbjct 406 AACGATGGTGAAATATATTTGCTCGGACAGGAGGAGGCCAGAGGAAACCCTGGTGGATGT 465 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| || |||||||||||||| | | || |||||||||||| Sbjct 466 CCGCAGCGGTTTTGCCGTGCAAATCGATCAGCCGACCTGAGTATAGGGGCGA 517 >seq67875 Length=1699 Score = 75.2 bits (82), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 48 TTGTTTGGGAATGCAGCTCTAA-ATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 |||||| ||||||||| | || | ||| ||| || | | || || ||| |||| | | Sbjct 375 TTGTTTTAGAATGCAGCCCAAAGAGGGGTGGTGAACTCCATCCAAGGCTCAATACTATGC 434 Query 107 A-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAG 165 | ||||||||||| ||||||| |||| ||| | ||||||| |||||| | |||| | Sbjct 435 ACGAGACCGATAGTCAACAAGTACCGTGAGGGAACGTTGAAAAGAACTTTGAAGAGAGGG 494 Query 166 TTAAAAAGCACGTGAAATTG 185 || || | ||||||| || Sbjct 495 TTCAACATTGCGTGAAACTG 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2077155579850