Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20japonicus_20[genbank_20GCA_5F001866495.1_202016-11- 04] 132,607 sequences; 664,370,087 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq95371 93.3 1e-16 >seq95371 Length=2170 Score = 93.3 bits (102), Expect = 1e-16 Identities = 120/165 (73%), Gaps = 12/165 (7%) Strand=Plus/Minus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 ||| | | ||||||||||||||| |||||||| | |||||||| |||| | || Sbjct 1856 TTTGTTGAATGTATTAGCTCTAGTATTACCACAGCTATCCATGGTATAAGACTTTGTCCG 1797 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT---GCTTATA 454 |||||| || | ||||||||| |||||||| || | || || | || || Sbjct 1796 ATAAACCATCA--------ATGAGCCATCTGCAGTTTCTCT-TGTATGTTCAGGATTGTA 1746 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499 |||| || ||| || |||||||||||| | |||||||||||||| Sbjct 1745 CTTATACGTGCGTGACTTAATCTTTGAAAAGAGCATATGACTACT 1701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508397103872