Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8939 93.3 8e-17 >seq8939 Length=22933 Score = 93.3 bits (102), Expect = 8e-17 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 85 AAAATTAGAGTGTTCAAAGCAGGCCTT-TGCTCGAATACATTAGCATGGAATAATAGAAT 143 |||| | |||||||||||||||| ||| |||||| ||||||||||| | ||| Sbjct 20839 AAAACTGAAGTGTTCAAAGCAGGCAAAGTGCCCGAATAGCCCAGCATGGAATAGTGGAAG 20898 Query 144 AGGACGTGCGGTTCTATTTTGTTGGTTTCTAG-GACCGCCGTAATGATTAATAGGGATAG 202 ||||| | ||||||||||| ||||| | || | | | | |||||| || ||||| | Sbjct 20899 AGGACCT-CGGTTCTATTTCGTTGGCCTTGAGAGCCTGAGGCAATGATCAACAGGGACTG 20957 Query 203 TCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACT 262 || |||| | || || || |||||| |||||||| ||| ||||| | Sbjct 20958 TCTGGGGCATTCGTGTTGCGCCGTGAGAGGTTAAATTCTTTGATCGTCGCAAGACGCCCG 21017 Query 263 ACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 || ||||||| || | ||| |||| |||||| |||| ||||||| Sbjct 21018 ACATCGAAAGCATTTGCAAAGAATGTCTTCATTGATCA-AGAACGAA 21063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915002692032