Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6024 105 3e-20 seq1326 105 3e-20 >seq6024 Length=35381 Score = 105 bits (116), Expect = 3e-20 Identities = 108/138 (78%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGC-TGTTGGGACCCGAAAGATGGTGAACTAT----GCCTGAATAGGG 603 ||| ||||||| ||| || | ||||||||||||||||||||| || | | ||| Sbjct 1806 GAGGAAGAGCA-AGCATGCTAAAACCCGAAAGATGGTGAACTATATTTGCTCGGACAGGA 1748 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 || |||||||||||| |||||||| | |||||||||| || |||||||||||||||| Sbjct 1747 GGAGGCCAGAGGAAACCCTGGTGGATGTCCGCAGCGGTTGTGCTGTGCAAATCGATCGTC 1688 Query 664 AAATTTGGGTATAGGGGC 681 | || |||||||||| Sbjct 1687 CGACCTGAGTATAGGGGC 1670 >seq1326 Length=128007 Score = 105 bits (116), Expect = 3e-20 Identities = 108/138 (78%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGC-TGTTGGGACCCGAAAGATGGTGAACTAT----GCCTGAATAGGG 603 ||| ||||||| ||| || | ||||||||||||||||||||| || | | ||| Sbjct 18979 GAGGAAGAGCA-AGCATGCTAAAACCCGAAAGATGGTGAACTATATTTGCTCGGACAGGA 18921 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 || ||||||||||| ||||||||| | ||||||| || || ||||||||||||||||| Sbjct 18920 GGAGGCCAGAGGAAATTCTGGTGGATGTCCGCAGCGATTGTGACGTGCAAATCGATCGTC 18861 Query 664 AAATTTGGGTATAGGGGC 681 | || |||||||||| Sbjct 18860 CGACCTGAGTATAGGGGC 18843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079537559450