Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apostichopus_20parvimensis_20[genbank_20GCA_5F000934455.1_202015-02- 27] 21,559 sequences; 873,088,235 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq158 223 6e-56 seq119 176 8e-42 seq1675 118 2e-24 >seq158 Length=213282 Score = 223 bits (246), Expect = 6e-56 Identities = 174/203 (86%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 75 CAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| | Sbjct 94982 CAGCTCAAGTTCCCTATTAGTGGGTGAAAAATCCAACGCTTGGCGAATTCTGCTTCGCAA 94923 Query 135 TGATA---GGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 94922 TGATACTGGGAAGAGCCAACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGC 94863 Query 192 TGCCACAAGCCAGTTA-TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250 ||||||||||||||| | ||||||||||| |||||| |||| || || || || | || Sbjct 94862 CGCCACAAGCCAGTTATTTCCTGTGGTAAC-TTTCTGACACCCCTTGCGTCGAACTAGGA 94804 Query 251 -GGGACTAAAGGATCGATAGGCC 272 | | | |||||||||||||| Sbjct 94803 CAAGTCGACAGGATCGATAGGCC 94781 >seq119 Length=240147 Score = 176 bits (194), Expect = 8e-42 Identities = 119/132 (90%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| | | ||||| || | |||| || |||||||||||||||||||||||||||||| Sbjct 121646 TACTGAACAGAATTGCCGTGACGGCGGCGTGTCATCAGTAGGGTAAAACTAACCTGTCTC 121705 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 121706 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 121765 Query 120 AATTCTGCTTCG 131 |||||||||||| Sbjct 121766 AATTCTGCTTCG 121777 >seq1675 Length=153639 Score = 118 bits (130), Expect = 2e-24 Identities = 83/95 (87%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 ||||||||||||| ||| ||||||||||||| | ||||||||||||| || || |||| Sbjct 19542 TAGGAAGAGCCGAAATCAAAGGATCAAAAAGTGAAGTCGCTATGAACGATTTGCCACCAC 19483 Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||| |||||| ||||||||||||||||||| |||| Sbjct 19482 AAGTCAGTTAACCCTGTGGTAACTTTTCTGACACC 19448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854215799904