Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq63303 176 1e-41 seq126435 134 4e-29 seq154068 125 2e-26 seq32295 122 3e-25 seq13734 77.0 1e-11 >seq63303 Length=5362 Score = 176 bits (194), Expect = 1e-41 Identities = 132/154 (86%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 241 CACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGG 300 ||| || |||||||| ||| ||| |||| | |||||||| || |||||||||||| | Sbjct 311 CACCTACGCTACACCTTTCATGTCCCTTCAAAGAGTCGGACCAG--TCAAGCTCAACATG 254 Query 301 GTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC----TAG 356 ||||||||||||||||||||| || |||||||||||||| ||||||||| ||| ||| Sbjct 253 GTCTTCTTTCCCCGCTGATTCTGCTAAGCCCGTTCCCTTTGCTGTGGTTCCGCTTAGTAG 194 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390 |||||||||||||||||||||||||| ||||||| Sbjct 193 ATAGTAGATAGGGACAGTGGGAATCTAGTTAATC 160 >seq126435 Length=1295 Score = 134 bits (148), Expect = 4e-29 Identities = 150/198 (76%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 271 CAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330 |||||| |||| ||| | ||||||| || |||||||| | ||| |||||| Sbjct 798 CAAAGTTAGACTGAAGTAAGTTTCAACAGCGTTGTCTTTCCCTTCCAGTTCTACCAAGCT 739 Query 331 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390 || |||||| ||| ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 738 -GT--CCTTGGTTGTAGTTTCATTAGATAGTAGACAGGGACAGTGGGAATCTTGTTAATC 682 Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 ||| | | ||||||| | || || |||| |||||||||||| |||| | | |||| Sbjct 681 AATTTAGGTGCGTCACCAGTTTGACGACGGAACATTTGGCTACCATAAGGAAAACGTAGT 622 Query 451 TACTCCCGCCGTTTACCC 468 || |||| ||||||| || Sbjct 621 TAATCCCACCGTTTATCC 604 >seq154068 Length=1351 Score = 125 bits (138), Expect = 2e-26 Identities = 90/104 (87%), Gaps = 11/104 (11%) Strand=Plus/Plus Query 377 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 396 GAAT-TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGGATTTGGC------ 448 Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||| ||| ||||||||||| Sbjct 449 ----GAGTCATAGTTACTCCCGCCGTTTGCCCACGCTTGGTTGA 488 >seq32295 Length=2209 Score = 122 bits (134), Expect = 3e-25 Identities = 81/89 (91%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC- 472 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 2209 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTCACCCTCGCT 2150 Query 473 -TTGGTTGAATTTCTTCACTTTGACATTC 500 || || ||||||||||| ||||||||| Sbjct 2149 TTTTTTTTAATTTCTTCACGTTGACATTC 2121 >seq13734 Length=1110 Score = 77.0 bits (84), Expect = 1e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||| ||||||||||||| | ||| ||| | ||||| ||||||| || Sbjct 681 AGTAGATAGGGACAGTAGGAATCTCGTTAAACTGTTCCTGCACATCACTTATTAGATAAC 740 Query 419 GAGGCAT 425 |||||| Sbjct 741 AAGGCAT 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1631727391168