Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq67915 271 2e-70 seq169339 136 1e-29 seq153087 113 1e-22 seq115036 80.6 8e-13 >seq67915 Length=866 Score = 271 bits (300), Expect = 2e-70 Identities = 276/357 (77%), Gaps = 12/357 (3%) Strand=Plus/Plus Query 89 GCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACC 148 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 437 GCCTGCTGCCTTCCTTGGATGTGGAAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAATC 496 Query 149 CTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGAT 208 || |||||||| ||||||| ||||||| |||| | ||||| ||| ||||||||| Sbjct 497 CTGGTTCCCCGTCACCCGTTACCACCATGGCAGGCACAGAACCTACGATCAAAAGTTGAT 556 Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGG-CTCAAGGCCATGCGATTCGTTAAGTTATT 267 |||||||| ||| |||||| | ||||||| | ||| ||||||||| | | ||||| Sbjct 557 AGGGCAGACATTCGAATGATCTGTCGCCGGTGTAAAGACCATGCGATCGGCTGGGTTATC 616 Query 268 ATGAATCACCAAGGAGCCC----CGAAGGGC-GTTGGTTTTTTATCTAATAAATACACCC 322 || ||||||| | | || |||| | ||| | || ||| |||||| ||| | Sbjct 617 CAGAGTCACCAAAGGGACCGGGGCGAACTCCGGTTTTGTCTTGGTCTGATAAATGCACGC 676 Query 323 CTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA 382 | || | | || |||||||| ||||||||||||||||| |||||||||||| Sbjct 677 C------AGAACGCTTCTTCCGCATGTATCAGCTCTAGAATTACCACAGTTATCCATGTA 730 Query 383 GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG 439 | | | || |||||| || ||||||||||||||||||||||||| |||||||| Sbjct 731 GGATGTGACGATCAAAGGTACCATAACTGATTTAATGAGCCATTCGCGTTTTCACTG 787 >seq169339 Length=1589 Score = 136 bits (150), Expect = 1e-29 Identities = 129/163 (79%), Gaps = 14/163 (9%) Strand=Plus/Plus Query 352 TAGCTCTAGAATTACCACGGTTAT----CCATGTAGTAAGGTACTATCAAATAAACGATA 407 ||| |||||||||||||| ||||| | |||||| | | | |||||| || | ||| Sbjct 320 TAGATCTAGAATTACCACAGTTATAATCCAATGTAGCATGTGAAGATCAAAGAA-CTATA 378 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG--- 464 |||||| ||||||||||||||||||||||||| || | ||| |||| || || Sbjct 379 ACTGATATAATGAGCCATTCGCAGTTTCACTG---AGGCAGTTTAAACTTGCACGTGGCA 435 Query 465 ---CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||| Sbjct 436 CTGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 478 >seq153087 Length=3274 Score = 113 bits (124), Expect = 1e-22 Identities = 84/98 (86%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||||||||||| |||||||||||| ||| | | | |||| || || Sbjct 2878 ATAACTGATTTAATGAGCCATTTGCAGTTTCACTG---AGACAGTTAAAACTTGCACCTG 2822 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 |||||||||||||||||||||||||| ||||||| ||| Sbjct 2821 CATGGCTTAATCTTTGAGACAAGCATTTGACTACGGGC 2784 >seq115036 Length=6738 Score = 80.6 bits (88), Expect = 8e-13 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||| ||||| ||| || ||||||||||||||||||||||||||||||||| Sbjct 534 CCGAGTCGGAATTGGC-AATCTGTATACCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 476 Query 123 TCAGGCTCCCTCTC 136 ||| ||||||| || Sbjct 475 TCATGCTCCCTTTC 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507192423936