Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq184351 167 2e-36 seq150367 120 2e-22 seq93348 105 5e-18 seq178124 96.9 3e-15 seq88155 93.3 3e-14 seq195337 87.8 1e-12 >seq184351 Length=2863 Score = 167 bits (184), Expect = 2e-36 Identities = 247/346 (71%), Gaps = 8/346 (2%) Strand=Plus/Minus Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 |||| || |||||||||| |||||||| || |||||||| |||||||| || || |||| Sbjct 2495 TGCAGGTTCCGGAGGCGCGCTGTTTCTATGGTTTCCAGATCGCCATGGAAAACGTGCACT 2436 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT 61396 ||||||||||||| | || || || | |||||| | || | ||| || | || ||| Sbjct 2435 CGGAGATGTACAGCCTGCTGATTGACAGCTACATCCGCGACCCGGCCGA--GCGACAGAT 2378 Query 61397 --TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 ||||| | ||| | ||||| || ||| ||| ||| || ||||| ||||| | | Sbjct 2377 GCTGTTCCACGCCGTGGAGACCATGCCGTGCGTGCGGCGCAAGGCGGACTGGGCGCTGCA 2318 Query 61455 TTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTC 61512 |||||| |||| ||| | | || || || || || | |||| || || | ||| Sbjct 2317 GTGGATCGCCAG--CAAGGACACGACGTTCGGCGAGCGGCTTGTGGCCTTCGCTGCGGTG 2260 Query 61513 GAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 ||||| || |||||| || |||||||| || ||||| ||| |||| || || || || Sbjct 2259 GAGGGCGTGTTTTTCTCGGGCTCGTTTGCGGCCATCTTCTGGCTGAAAAAGCGCGGGCTG 2200 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 | ||||| ||||| ||| || ||| |||| || ||||||| Sbjct 2199 CTCCCCGGCCTGACGTTCTCTAACGAGCTGATCAGCCGAGACGAGG 2154 >seq150367 Length=3699 Score = 120 bits (132), Expect = 2e-22 Identities = 210/304 (69%), Gaps = 14/304 (5%) Strand=Plus/Minus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || || ||||| ||||| || || | | || || |||||||| || ||||| || || Sbjct 2395 GACATATGGCGGATGTAGAAGAAAACCTAGGCATCATTCTGGACAGTTGAGGAAGTAGAC 2336 Query 61144 TTGTCCAAAGA---CATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAA---CATTTC 61197 | || ||||| | || |||||||| | ||| | ||| || || ||| Sbjct 2335 CTCTCGAAAGAGGACTTGGCCTACTGGGAGAAGCT---GAGTGATGACAAAAGACACTTC 2279 Query 61198 ATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGT-----ATCGTCAATGAGAATT 61252 || ||||| || |||| |||||||| ||| || || | ||||||||||||| Sbjct 2278 ATCAAACACGTCCTGGCATTCTTTGCGGCTAGCGATGGACAACCAACGTCAATGAGAATC 2219 Query 61253 TATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCC 61312 | |||| | ||| || ||||| | ||| | ||||| | || ||||| ||||||| Sbjct 2218 TGGTGGAGAGATTCAGCCAAGAGGTCAAGGTGACCGAGGCCAGGTGCTTCTAGGGCTTCC 2159 Query 61313 AGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 | ||||||||||| ||| | ||||| || ||||||||| | | ||||| || | ||||| Sbjct 2158 AAATTGCCATGGAAAATATTCACTCTGAAATGTACAGTCTCTTGATCGACACCTTCATCA 2099 Query 61373 GGGA 61376 ||| Sbjct 2098 AGGA 2095 >seq93348 Length=6301 Score = 105 bits (116), Expect = 5e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 61231 GACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 || |||||||||||||| ||| | |||| | ||| || ||| | || ||| | ||| Sbjct 5263 GATGGTATCGTCAATGACAATCTGGTGGAGAGATTCAGCCAAGAGATCCAGGTGGCCGAG 5204 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 || | || ||||| |||||||||||||||||||| ||| | || || || ||||||||| Sbjct 5203 GCCAGGTGCTTCTATGGCTTCCAGATTGCCATGGAAAATATTCAATCTGAAATGTACAGT 5144 Query 61351 GTTCTCATCGATACGTACATCAGGGA 61376 || | ||||| || || |||| ||| Sbjct 5143 CTTTTGATCGACACCTATATCAAGGA 5118 >seq178124 Length=5838 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 61231 GACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAG 61290 || |||||||||||||| ||| | |||| | ||| || ||| | || ||| | ||| Sbjct 2447 GATGGTATCGTCAATGAAAATCTGGTGGAGAGATTCAGCCAAGAGATCCAGGTGGCCGAG 2388 Query 61291 GCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGT 61350 || | || ||||| |||||||||||||||||||| || | || || || ||||||||| Sbjct 2387 GCCAGGTGCTTCTATGGCTTCCAGATTGCCATGGAAGATATTCAATCTGAAATGTACAGT 2328 Query 61351 GTTCTCATCGATACGTACATCAGGGA 61376 | | ||||| || || |||| ||| Sbjct 2327 CTCTTGATCGACACCTATATCAAGGA 2302 >seq88155 Length=6096 Score = 93.3 bits (102), Expect = 3e-14 Identities = 116/156 (74%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 ||| || || || || ||||||||||| || ||||| || ||||| || ||||| || Sbjct 1476 CTCATCTGGGGCCGTGTACTCGACAATCTCTGTGCAGAGGTTACTACACTTGATGGTCCC 1417 Query 66097 CAAATTCTGTTGATT--ACT-CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 || ||||| || || ||| |||| ||||| ||||||||||||| |||||| || | Sbjct 1416 CAGGTTCTGCTGGTTCGACTTCTTG---TTGCACGCATCCTTGTACAGCATGTAGGGGTT 1360 Query 66154 GCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 || ||||| |||| ||| ||||| |||| ||| Sbjct 1359 TCCCGTCTCTGTCTGGGCCTCGATGATAGCGTACCA 1324 >seq195337 Length=3657 Score = 87.8 bits (96), Expect = 1e-12 Identities = 122/167 (73%), Gaps = 7/167 (4%) Strand=Plus/Plus Query 66027 AGACAGCT-ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 |||| ||| | ||| || || || || ||||| ||||| |||||||| || || || || Sbjct 2710 AGACTGCTGACCTCATCTGGTGCCGTGTACTCCACAATCTCGGTGCAGAGGTTGCTACAC 2769 Query 66086 CGTATGGTGCCCAAATTCTGTTGATT--ACT-CTTGCGATTGCATGCATCCTTGTACATC 66142 ||||| |||| || || || || ||| |||| ||||| ||||||||||||| | Sbjct 2770 TTGATGGTCCCCAGGTTTTGCTGGTTGGACTTCTTG---TTGCACGCATCCTTGTACAGC 2826 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 ||||| || | |||||||| || | ||| ||||| |||| ||| Sbjct 2827 ATGTAGGGGTTTCCGGTCTCCGTCTGAGCCTCGATGATAGCGTACCA 2873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396539010278240