Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asymmetron_20lucayanum_20[genbank_20GCA_5F001663935.1_202016-06-16] 212,366 sequences; 460,590,149 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq33786 149 9e-31 >seq33786 Length=3497 Score = 149 bits (164), Expect = 9e-31 Identities = 265/387 (68%), Gaps = 0/387 (0%) Strand=Plus/Minus Query 162448 GTAAGAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAG 162507 ||||| ||||||| || || ||||| | ||||| || || ||||| | || ||| Sbjct 1924 GTAAGGTTCTACCAGGCATCAACAAGTGAAATGTATGGACTGGTGCAGGAAATCCCACAG 1865 Query 162508 AAAGAAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTC 162567 || || ||||| ||| | |||||| |||| || ||||||| || || |||||| | | Sbjct 1864 AAGGAGACCACGCCATTCTATCCAAGATCTCCCTATGGAGCAGCGAAGGTATATGCATAC 1805 Query 162568 TGGATCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTC 162627 ||| | | ||||||||||| ||| |||| |||| || || || || ||| Sbjct 1804 TGGGTAGTGGTCAACTACAGGGAGGCCTACAACATGTTCGCCTGTAATGGGATCCTGTTC 1745 Query 162628 AATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTG 162687 || ||||| || || | || || || || ||||| || | ||||| | ||| | || Sbjct 1744 AACCACGAGAGTCCAAGAAGGGGGGAAACATTCGTAACGAGAAAGATAACCAGAGGCGTG 1685 Query 162688 TCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGT 162747 || ||| | |||| | |||| ||| | ||||||||| ||| | | | | Sbjct 1684 GCCAAAATCCTTTTGGGGCAGCAAAATGACATTATACTTGGAAATCTCGACTCTAAAAGA 1625 Query 162748 GACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAG 162807 || |||||||| ||||| ||||||| ||| |||||| |||| || ||||| ||| | Sbjct 1624 GATTGGGGACATGCCAAGGACTACGCCAGGGCGATGTGGATGATTCTACAGCATGAGGTG 1565 Query 162808 CCAGATGATTATGTGATCGCAACTGGT 162834 || ||||| | ||| || || || ||| Sbjct 1564 CCCGATGACTTTGTCATAGCCACAGGT 1538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 689623669694160