Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq23663 78.8 5e-13 seq12455 78.8 5e-13 seq12362 78.8 5e-13 seq56793 71.6 8e-11 >seq23663 Length=6122 Score = 78.8 bits (86), Expect = 5e-13 Identities = 90/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 ||||||||| |||||| |||| || | ||| ||||||| ||| ||| || Sbjct 2032 GAACCCAAAAACTTTGGTTTCCCGGGGGCAGCCTGCCGAGTCAT--TGAAGCAACTCCGG 2089 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct 2090 CGGATTGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 2148 >seq12455 Length=71386 Score = 78.8 bits (86), Expect = 5e-13 Identities = 90/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 ||||||||| |||||| |||| || | ||| ||||||| ||| ||| || Sbjct 64893 GAACCCAAAAACTTTGGTTTCCCGGGGGCAGCCTGCCGAGTCAT--TGAAGCAACTCCGG 64950 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct 64951 CGGATTGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 65009 >seq12362 Length=1066127 Score = 78.8 bits (86), Expect = 5e-13 Identities = 90/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGAT--AACATCGC 58 ||||||||| |||||| |||| || | ||| ||||||| ||| ||| || Sbjct 326321 GAACCCAAAAACTTTGGTTTCCCGGGGGCAGCCTGCCGAGTCAT--TGAAGCAACTCCGG 326378 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||| ||||| ||||| ||||| ||| | ||||||||||||||||||||||||||| Sbjct 326379 CGGATTGCTAGTTGGCATCGTTTATGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 326437 >seq56793 Length=194830 Score = 71.6 bits (78), Expect = 8e-11 Identities = 47/52 (90%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| ||||| ||||| ||| || ||||||||||||||||||||||||||| Sbjct 40128 CTAGTTGGCATCGTTTATGGTCAAAACTACGACGGTATCTGATCGTCTTCGA 40077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278228622180