Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq23663 89.7 6e-16 seq12455 89.7 6e-16 seq12362 89.7 6e-16 >seq23663 Length=6122 Score = 89.7 bits (98), Expect = 6e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| || | ||||||||| |||||||||||| ||||| ||| Sbjct 2297 AAACCAGCAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCA 2355 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 | |||||||||||||||||||||||| |||| ||||| || | || | | |||| Sbjct 2356 AATCGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTTCCGGCCACCCGAGACAC 2415 Query 129 -CAATGAAG-GCA-TACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGT 185 || | ||| ||| | |||| ||| |||||||| | || | |||||| || | | Sbjct 2416 TCAGTCAAGAGCACCAAGGGCAAACCGGGAGGTAGGTCAGGACGA-GCAGTAACCGGCAT 2474 Query 186 GAGGCGGACCA 196 | | ||||||| Sbjct 2475 GCGCCGGACCA 2485 >seq12455 Length=71386 Score = 89.7 bits (98), Expect = 6e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| || | ||||||||| |||||||||||| ||||| ||| Sbjct 65158 AAACCAGCAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCA 65216 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 | |||||||||||||||||||||||| |||| ||||| || | || | | |||| Sbjct 65217 AATCGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTTCCGGCCACCCGAGACAC 65276 Query 129 -CAATGAAG-GCA-TACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGT 185 || | ||| ||| | |||| ||| |||||||| | || | |||||| || | | Sbjct 65277 TCAGTCAAGAGCACCAAGGGCAAACCGGGAGGTAGGTCAGGACGA-GCAGTAACCGGCAT 65335 Query 186 GAGGCGGACCA 196 | | ||||||| Sbjct 65336 GCGCCGGACCA 65346 >seq12362 Length=1066127 Score = 89.7 bits (98), Expect = 6e-16 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| || | ||||||||| |||||||||||| ||||| ||| Sbjct 326586 AAACCAGCAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCA 326644 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACAC 128 | |||||||||||||||||||||||| |||| ||||| || | || | | |||| Sbjct 326645 AATCGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGTTCCGGCCACCCGAGACAC 326704 Query 129 -CAATGAAG-GCA-TACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGT 185 || | ||| ||| | |||| ||| |||||||| | || | |||||| || | | Sbjct 326705 TCAGTCAAGAGCACCAAGGGCAAACCGGGAGGTAGGTCAGGACGA-GCAGTAACCGGCAT 326763 Query 186 GAGGCGGACCA 196 | | ||||||| Sbjct 326764 GCGCCGGACCA 326774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594821392908