Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathymodiolus_20platifrons_20[genbank_20GCA_5F002080005.1_202017-04- 05] 65,662 sequences; 1,658,191,953 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq23663 123 3e-26 seq12455 123 3e-26 seq12362 123 3e-26 >seq23663 Length=6122 Score = 123 bits (136), Expect = 3e-26 Identities = 138/179 (77%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| ||||| ||||| || Sbjct 2397 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTTGCCTGAATAATGGTGCA 2338 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA-CCGCCCGTAAT 127 ||||||||| ||||||||| | ||||||||||||| ||||| | ||| | ||||| Sbjct 2337 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTTGAGGTAAT 2280 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 2279 GATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 2221 >seq12455 Length=71386 Score = 123 bits (136), Expect = 3e-26 Identities = 138/179 (77%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| ||||| ||||| || Sbjct 65258 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTTGCCTGAATAATGGTGCA 65199 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA-CCGCCCGTAAT 127 ||||||||| ||||||||| | ||||||||||||| ||||| | ||| | ||||| Sbjct 65198 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTTGAGGTAAT 65141 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 65140 GATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 65082 >seq12362 Length=1066127 Score = 123 bits (136), Expect = 3e-26 Identities = 138/179 (77%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| ||||| ||||| || Sbjct 326686 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATTTGCCTGAATAATGGTGCA 326627 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA-CCGCCCGTAAT 127 ||||||||| ||||||||| | ||||||||||||| ||||| | ||| | ||||| Sbjct 326626 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGCTGGTTT-TCGGAGCTTGAGGTAAT 326569 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || | ||| | |||||| | ||||| ||| | ||||||||||||||||| Sbjct 326568 GATTAAGAGGGACTGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 326510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511674316480