Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq231405 187 4e-45 seq212967 129 9e-28 seq112825 104 4e-20 >seq231405 Length=1467 Score = 187 bits (206), Expect = 4e-45 Identities = 203/259 (78%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 669 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 612 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | |||| || ||| | ||||| | ||||| | | ||||| | || Sbjct 611 CTCGTTCATGGGGAACAGTTACAAGCCCCAATCCCTAGCACGAAGGAGATTCAACGGGTT 552 Query 120 ACCCGGACCTGTCGG-CCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| ||| |||| ||| || | | | || ||| | | |||||||||||||||||| Sbjct 551 TCCCAACCCTTTCGGGCCAGGGAGGCATCCACGCTGATTCCTTCAGTGTAGCGCGCGTGC 492 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG-GCCTAA 237 ||||| | |||||||||||||||||||||||||||||| ||||| || |||| | |||| Sbjct 491 GGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAA--TTTCGTGTGGCTAA 435 Query 238 AAGGCCATC-TCCCTCGAA 255 | | | || |||||| || Sbjct 434 ACGCCACTCGTCCCTCTAA 416 >seq212967 Length=2176 Score = 129 bits (142), Expect = 9e-28 Identities = 166/220 (75%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGAC-TCGCGCTTACTAGGAATTT 59 ||||||||| ||||||| || ||| | | || ||||| | | |||||||||||||| Sbjct 210 GTACAAAGGACAGGGACATAATCAGCACATTCT-GATGAAATAGTGCTTACTAGGAATT- 267 Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGA-AATTTCAAAGAT 118 ||||||||| | || |||||||| | ||||| |||||| || ||||||| | | Sbjct 268 CCTCGTTGACGGAGAATAATTGCAAGCTCCGATCCCAGTCACGAAGAGAATTTCATGG-T 326 Query 119 TACCCGGACCTGTCGGCCAAGGT-GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||| |||||| ||| || | | || |||| | |||||||||||||||| Sbjct 327 TACCCACTTCTGTCGAAGTAGGAAGAAACATTC--TGAACTCTCCAGTGTAGCGCGCGTG 384 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | ||| | ||||||||||||||||||||||||||||||| Sbjct 385 CAGCCTCGGACATCTAAGGGCATCACAGACCTGTTATTGC 424 >seq112825 Length=307 Score = 104 bits (114), Expect = 4e-20 Identities = 87/105 (83%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCG-GCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||||| ||| ||| |||| || | || || || | | ||||||||||||| || Sbjct 18 TTACCCGACCCTTTCGAGCCA----GACAAACACGCTGCCTCCTTCAGTGTAGCGCGTGT 73 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 |||||||||||||||||||||||||||||||||||||||||| || Sbjct 74 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCCCA 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749585743715