Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq231405 210 4e-52 seq212967 154 3e-35 seq17022 102 1e-19 >seq231405 Length=1467 Score = 210 bits (232), Expect = 4e-52 Identities = 220/283 (78%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||| ||| | || ||||| ||| | | |||||||||||||||||||||||||| Sbjct 1349 TGCTCTTCGCTGAGCGTCCCGGGTGGCCGGCGCGTTTACTTTGAAAAAATTAGAGTGTTC 1290 Query 100 AAAGCAGGCCTT--TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTC 157 |||||||||| ||| ||||| |||||||||||| ||||||||| | |||||| Sbjct 1289 AAAGCAGGCCGAGCTGCCTGAATAATGGTGCATGGAATAATGGAATAGGACCT-CGGTTC 1231 Query 158 TATTTTGTTGGTTTCTAGGACC--GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAG 215 |||||||||||||| | ||| | | ||||||||||| ||||| | |||||| | | Sbjct 1230 TATTTTGTTGGTTT-TCGGAACTGGAGGTAATGATTAACAGGGACAAACGGGGGCATTCG 1172 Query 216 TATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGT 275 |||| || ||||||||||||||||||| ||||| ||||||||||||||| | Sbjct 1171 TATTGCGGCGTTAGAGGTGAAATTCTTGGATCGCCGCAAGACGAACTACTGCGAAAGCAT 1112 Query 276 TCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | |||| |||||||||||| ||| |||||||||| || || Sbjct 1111 TTGTCAAGAATGTTTTCATTAGTCA-AGAACGAAAGTCAGAGG 1070 >seq212967 Length=2176 Score = 154 bits (170), Expect = 3e-35 Identities = 188/250 (75%), Gaps = 5/250 (2%) Strand=Plus/Minus Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||| || |||||||||| |||||||||||| | ||||||||| || ||| || Sbjct 1108 GCCAGAACGTTTACTTTGAGAAAATTAGAGTGCTAAAAGCAGGCTCACGCCTATATATAT 1049 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG- 183 | |||||||||||| |||| || | || || ||||| |||||||| ||| | | Sbjct 1048 T-GCATGGAATAATGAAATAAGATCT-CGATTTTATTTCGTTGGTTT-TAGAAATTGAGA 992 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||| || ||||| || ||| | ||| |||||||||||||||| Sbjct 991 TAATGATTAATAGGATCAGAGGGGGGCGTACGTACTGTGGTGTGAGAGGTGAAATTCTTG 932 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| | ||| ||| | ||||| |||||| ||||| |||||||||||||||| | Sbjct 931 GATCGCCACAGGACGAACAGCAGCGAAGGCGTTCGCCAAGAATGTTTTCATTAATCA-AG 873 Query 304 AACGAAAGTT 313 |||||||||| Sbjct 872 AACGAAAGTT 863 >seq17022 Length=546 Score = 102 bits (112), Expect = 1e-19 Identities = 109/142 (77%), Gaps = 3/142 (2%) Strand=Plus/Plus Query 157 CTATTTTGTTGGTTTCTAGGACC--GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||| | ||| | | ||||||||||| ||||| | |||||| | Sbjct 406 CTATTTTGTTGGTTT-TCGGAACTGGAGGTAATGATTAACAGGGACAAACGGGGGCATTC 464 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| || ||||||||||||||||||| ||||| ||||||||||||||| Sbjct 465 GTATTGCGGCGTTAGAGGTGAAATTCTTGGATCGCCGCAAGACGAACTACTGCGAAAGCA 524 Query 275 TTCACCAAGGATGTTTTCATTA 296 || |||| |||||||||||| Sbjct 525 TTTGTCAAGAATGTTTTCATTA 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912167018048