Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq95738 161 4e-37 seq135203 149 3e-33 seq284809 147 9e-33 seq61843 132 2e-28 seq277942 122 4e-25 seq160575 118 4e-24 seq9303 78.8 4e-12 >seq95738 Length=4829 Score = 161 bits (178), Expect = 4e-37 Identities = 225/312 (72%), Gaps = 34/312 (11%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TGTC- 462 || ||||||||| |||||||||||||||||||||||| |||||| ||||| ||| Sbjct 1271 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGCGCGCGAGTCATTGGGCTGTAC 1212 Query 463 -AAACCCGTGCGCGTAATGAAAGTGAA--------CGG--------AGGTGGGAACC--- 502 |||||| ||| | |||||| || ||| |||||||| || Sbjct 1211 GAAACCCAAAGGCGCAGTGAAAGCGAGGGTCGCCCCGGGCTGACCCAGGTGGGATCCTTT 1152 Query 503 -----CGTG-AGG--GTGCACCATCGACCGATCCTGAT---GTCTTCGGATGGATTTGAG 551 |||| ||| | |||||| || || ||| | ||| || | ||| ||| Sbjct 1151 TGCCCCGTGCAGGAGGCGCACCACCGGCCCGTCCCGTCTGCGTCGTCAG-TGGGGCGGAG 1093 Query 552 TAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 ||||| | ||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 1092 CTAGAGCGCGCACGCTGGGACCCGAAAGATGGTGAACTATGCCTGAGTAGAACGAAGCCA 1033 Query 612 GAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGG 671 ||||||||||||||||| | || |||| ||||| |||||||||||||||||||| || | Sbjct 1032 GAGGAAACTCTGGTGGAAGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTTG 973 Query 672 GTATAGGGGCGA 683 |||||||||||| Sbjct 972 GTATAGGGGCGA 961 Score = 132 bits (146), Expect = 2e-28 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1813 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1754 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || ||| ||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 1753 ACATGCACGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 1694 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 1693 AGAGAGTTCAAGAGTACGTGAAA 1671 >seq135203 Length=275 Score = 149 bits (164), Expect = 3e-33 Identities = 100/112 (89%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | Sbjct 126 CCCGAAAGATGGTGAACTATGCCTGAGTAGAACGAAGCCAGAGGAAACTCTGGTGGAAGT 67 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||| ||||| |||||||||||||||||||| || ||||||||||||| Sbjct 66 CCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTTGGTATAGGGGCGA 15 >seq284809 Length=1030 Score = 147 bits (162), Expect = 9e-33 Identities = 104/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||| Sbjct 489 GTTGGGACCCGAAAGATGGTGAACTATGCCTGGCAAGGGCGAAGCCAGGGGAAACTCTGG 548 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || | ||||| |||||||||||||| ||||| ||||||||||||||| Sbjct 549 TGGAGGCCCGTTTGGATTCTGACGTGCAAATCGATCCTCAAAGCTGGGTATAGGGGCGA 607 >seq61843 Length=409 Score = 132 bits (146), Expect = 2e-28 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 345 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 286 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || ||| ||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 285 ACATGCACGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 226 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 225 AGAGAGTTCAAGAGTACGTGAAA 203 >seq277942 Length=7678 Score = 122 bits (134), Expect = 4e-25 Identities = 115/145 (79%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1247 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1306 Query 100 --ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 |||| | ||| ||||||||| ||||||| |||| ||||| |||||| |||||| Sbjct 1307 ACATTGAC--GAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTAGAAAAGAACTTTGA 1364 Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182 | |||| || ||||| |||||||| Sbjct 1365 AGAGAGTATTCAAAAGTACGTGAAA 1389 >seq160575 Length=2773 Score = 118 bits (130), Expect = 4e-24 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT--ATGCCTGAATAGGGTGAA 607 |||||||| ||| || |||||||||||||||||||| ||| || ||| |||| Sbjct 1577 AGTAAGAGTATATGCAATGAGACCCGAAAGATGGTGAACTTAATGTGTG--TAGAATGAA 1520 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||| |||||| |||||||| | ||| |||||||||| |||||||||||||||||||| Sbjct 1519 GCCAGGGGAAACCCTGGTGGAAGTTCGTAGCGGTTCTGACGTGCAAATCGATCGTCAAAC 1460 Query 668 TTGGGTATAGGGGCGA 683 || | |||||||| Sbjct 1459 ATGCATTAAGGGGCGA 1444 Score = 109 bits (120), Expect = 2e-21 Identities = 112/145 (77%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTAA 97 ||||| | || ||||| || ||| | | || ||||| ||||| || ||| |||||||| Sbjct 2338 CGAGTAGCGTAGTTTGAGATTGCTACGCCAACGTGGGACGTAAACTTGTTCCAAAGCTAA 2279 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 |||| ||||||||||||| ||||||| |||| ||||| ||||||||||| || Sbjct 2278 ATATCATAACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGA 2219 Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182 | ||||||||||| || |||| ||| Sbjct 2218 AGAGAGAGTTAAATAGTACGTAAAA 2194 >seq9303 Length=580 Score = 78.8 bits (86), Expect = 4e-12 Identities = 55/63 (87%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||||||| |||||||||||||||||||||||| ||| ||||||| || ||||| |||| Sbjct 335 TTGGGACGCGAAAGATGGTGAACTATGCCTGAGTAGAACGAAGCCAAAGAAAACTGTGGT 394 Query 626 GGA 628 ||| Sbjct 395 GGA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2072891448550