Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq101527 318 1e-84 seq4722 228 2e-57 seq83827 185 2e-44 seq212948 113 1e-22 >seq101527 Length=647993 Score = 318 bits (352), Expect = 1e-84 Identities = 294/371 (79%), Gaps = 10/371 (3%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 || || |||||||||| || | || ||||||||||||||||| | ||||||| ||| Sbjct 159715 TAACCTGCATCTTCACAGGTACTAAAATTTCACCGAGTCTATAGCCGAGACAGCGCCGGG 159774 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || ||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 159775 ATGATTACGCCATTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTCGCTACCTTAGGA 159834 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-----ATTGCT 175 ||||||||||||||||||||||| | ||||||| || ||| ||||||| | | Sbjct 159835 CCGTTATAGTTACGGCCGCCGTTCATCGGGGCTTCAGGTCAATGCTTCGCGGCAAAACCG 159894 Query 176 CTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG 235 || ||| || | |||||||||| ||| |||||||||||| | ||||||| ||||| Sbjct 159895 CTGACATCTCGCTTTAACCTTCCGACACTGGGCAGGCGTCACCCTGTATACATTGTCTTA 159954 Query 236 CGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT 295 |||||||||| | | |||||||||||||||||||| | ||||| || ||| ||| Sbjct 159955 CGACTTAGCACAGAGCTGTGTTTTTGGTAAACAGTTCCCCCGGCCTCTTTACTGAGGC-- 160012 Query 296 GTCATAG--ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAA 353 |||||| | ||||||||||| | || |||||||| ||||||| |||||||||| Sbjct 160013 -TCATAGTTATGAGCACCCCTTCTTGCGAACGTACGGGGTGATTTTGCAGAGTTCCTTAG 160071 Query 354 CAATAGTTCTC 364 | |||||| || Sbjct 160072 CTATAGTTATC 160082 >seq4722 Length=601 Score = 228 bits (252), Expect = 2e-57 Identities = 156/173 (90%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| |||||||||||||| || ||||||||||| ||| || |||||||||||||||| Sbjct 427 TACTCGGCATCTTCACCGAGACTACAATTTCACAGAGCTCATGGTTGAGACAGTGCCCAG 486 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 487 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 546 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTG-CTTCGATT 172 |||||||||||||||||||||||||||||||||| || ||| || ||||| || Sbjct 547 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAG-TCAATGCCTTCGGTT 598 >seq83827 Length=360 Score = 185 bits (204), Expect = 2e-44 Identities = 172/216 (80%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 149 GGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGC 208 |||||| | ||| ||||||| || | |||||||||| |||||||||| |||| |||| Sbjct 2 GGGCTTCATATCATTGCTTCGCTTACGCTAACAGATCAACTTAACCTTCGGGCACTGGGC 61 Query 209 AGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACA 268 |||||||| | | |||||||| |||| ||| |||||| | | ||||||||||||||||| Sbjct 62 AGGCGTCACCCCATATACATCATCTTACGATTTAGCATAGAGTTGTGTTTTTGGTAAACA 121 Query 269 GTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTAC 328 ||||| || |||| ||| | ||| | || | ||||||||| || | || |||| Sbjct 122 GTCGCCCCCACCGATTC-GTGCCG-CTGGCTTACGCCAGCACCCCTTATCGCGAACTTAC 179 Query 329 GGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||||||||| ||||||||||||||||||| || Sbjct 180 GGGGTCATTTTGCAGAGTTCCTTAACAATAGTTGTC 215 >seq212948 Length=204 Score = 113 bits (124), Expect = 1e-22 Identities = 126/165 (76%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 135 GCCGCCGTTTACTGGGGCTTAAGT-TCACTGCTTCGA--TTGCTCTAACAGATCCCCTTA 191 |||||| || || ||||||||| || ||||| | || |||||| ||| || Sbjct 204 GCCGCCATTCACGAGGGCTTAAGCATCGAAGCTTCAACTTTCGTCTAACCTCTCCGTTTG 145 Query 192 ACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG--CGACTTAGCAGAAA 249 ||||| ||| ||||||||||||| | ||||| ||||||| |||||| ||| | Sbjct 144 ACCTTTTCGCATTGGGCAGGCGTCAGACCTTATACTTCGTCTTATTCGACTTTGCAAAGT 85 Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 |||||||||||||||||||||||| |||||| |||||||||||| Sbjct 84 CCTGTGTTTTTGGTAAACAGTCGCCTGGGCCATTTCTCTGCGGCC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1058879195776