Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq101527 432 1e-118 seq216453 205 3e-50 seq304478 201 3e-49 >seq101527 Length=647993 Score = 432 bits (478), Expect = 1e-118 Identities = 401/503 (80%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162704 TACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 162645 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||||||||||||||||||||||| | |||||||||| || || Sbjct 162644 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCTAGGCTTGACATCCCTTGCAATATC 162585 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGA---CAGAGTGACAGGTGATGCATGGTTGTCGT 177 | || | | |||| || || || | |||||||| |||||||||||||| Sbjct 162584 GTG-GAAACACGTTT-------GGAGGTTATCAAGGAGACAGGTGGTGCATGGTTGTCGT 162533 Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||| |||||||||||||||| ||||||||||| ||||||||||||||| | |||| | Sbjct 162532 CAGTTCGTGTCGTGAGATGTATGGTTAAGTCCCATAACGAGCGCAACCCTCATCCTTATT 162473 Query 238 TGCCATCATTAAGTTGGGCACTCTAAGTTGACTGC--CGGTGACAAACCGGAGGAAGGTG 295 ||| | |||| ||||| | ||| |||| ||||| | || || |||||||||| Sbjct 162472 TGCTAACATTCAGTTGAGAACTATAAGGAAACTGCTACCGT---AAGGTAGAGGAAGGTG 162416 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct 162415 AGGATGACGTCAAATCATCATGCCCCTTATGCCTAGGGCTACACACGTGCTACAATGGTC 162356 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCC-ATAAAGTTGTTCTCAGTTC 414 |||||||||| ||||| | || | ||| |||||| | |||| | ||||||||| Sbjct 162355 GGTACAAAGGGCTGCGAAGGAGTGATCTGGAGCTAATCCCAACAAAGCCGATCTCAGTTC 162296 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC- 473 |||| | ||||||||| |||||| ||||| |||||||||||||||||| |||||| Sbjct 162295 GGATAGGAGTCTGCAATTCGACTCCTTGAAGTCGGAATCGCTAGTAATCGTGAATCAGCT 162236 Query 474 ATGCTACGGTGAATACGTTCCCG 496 | | ||||||||||||||| || Sbjct 162235 ACGTCACGGTGAATACGTTCTCG 162213 >seq216453 Length=201 Score = 205 bits (226), Expect = 3e-50 Identities = 170/207 (82%), Gaps = 12/207 (6%) Strand=Plus/Plus Query 35 GGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTAC 94 ||| ||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 1 GGGAACCCGCACAAGCGGTGGAGCATGTGGTTTAATTTGAAGATACGCGGAGAACCTTAC 60 Query 95 CAAATCTTGACATCCTCTG-ACCCCTCTAGAGATAGAGGTTTCCCCTTCGGGGG--ACAG 151 | | | |||||||| |||| | || |||||||| || | | || |||| Sbjct 61 CCACTTTTGACATCTTCTGCAATGCTATAGAGATATAG---------TGGAGGTTAACAG 111 Query 152 AGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCG 211 | |||||| || ||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 112 AATGACAGATGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTCGGTTAAGTCCGG 171 Query 212 CAACGAGCGCAACCCTTAAGCTTAGTT 238 ||||||||||||||| || ||||||| Sbjct 172 CAACGAGCGCAACCCCTATCCTTAGTT 198 >seq304478 Length=506 Score = 201 bits (222), Expect = 3e-49 Identities = 190/238 (80%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 252 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||||| ||| | || | || | | Sbjct 251 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCAAGGCTT-AAAT-GTACAACGCATA 194 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 || | || |||| |||| | || ||||| ||||||||||||||||| Sbjct 193 ATAAGGAAACTTATTAGTCTTC---GGACGGTGTACAAGGTGCTGCATGGTTGTCGTCAG 137 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||| |||||| ||| || |||||| || ||||||||||||||||| |||||| Sbjct 136 CTCGTGCCGTGAGGTGTCGGCTTAAGT-CCATAACGAGCGCAACCCTTATCTTTAGTT 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1499015728960