Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq231405 257 3e-66 seq212967 176 7e-42 seq235048 127 3e-27 seq625 125 1e-26 seq112825 109 9e-22 seq245 100 5e-19 >seq231405 Length=1467 Score = 257 bits (284), Expect = 3e-66 Identities = 210/251 (84%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 513 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG 454 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA 131 | |||| ||| ||||| | |||| | |||||||||||||| || | ||| Sbjct 453 C-TCAAT-TTCGTGTGGCTAAACGCCACTCGTCCCTCTAAGAAGTT-GCGCCGGCGCATC 397 Query 132 GTCGATGGGGC----TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | || ||| |||||| ||| || ||||||||||||||||||||||||||||| Sbjct 396 GAGGAACCGGCGAACTATTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 337 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 336 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCT 277 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 276 ATCAATCTGTC 266 >seq212967 Length=2176 Score = 176 bits (194), Expect = 7e-42 Identities = 190/249 (76%), Gaps = 11/249 (4%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| || Sbjct 369 CAGTGTAGCGCGCGTGCAGCCTCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCCA 428 Query 77 AACTTCCATTGGCTGGAA----GCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG 132 ||| ||||| || |||| | ||| |||||||| | | || | Sbjct 429 T--TTCGTGTGGCTTAAAAAGTGCCACTTATCCTGCTAAGAAGTCTTGAAAAGTCCCTG- 485 Query 133 TCGA---TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189 ||| | | |||||||| | | |||||||||||||||| |||||| ||||||| Sbjct 486 -CGAACTTTAGACTATTTAGTAAGCCGGAGTCTCGTTCGTTATCGAAATTAATCAGACAA 544 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||| |||||| ||||| ||||| ||||||||||||||||| ||||||||||||||| | Sbjct 545 ATCGCTCCACGAACTACGAACGACCATGCACCACCACCCACCTAATCAAGAAAGAGCTCT 604 Query 250 CAATCTGTC 258 ||||||||| Sbjct 605 CAATCTGTC 613 >seq235048 Length=33064 Score = 127 bits (140), Expect = 3e-27 Identities = 76/80 (95%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 8175 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAA 8116 Query 239 GAAAGAGCTATCAATCTGTC 258 |||||| ||||||||||||| Sbjct 8115 GAAAGAACTATCAATCTGTC 8096 >seq625 Length=427130 Score = 125 bits (138), Expect = 1e-26 Identities = 94/108 (87%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 151 AGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC 210 ||| || |||| |||| ||||| |||||||| |||||| || || |||||||||||||| Sbjct 105791 AGGCTAGAGTCTTGTTCATTATCAGAATTAAC-AGACAA-TCGCTTCACCAACTAAGAAC 105734 Query 211 GGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 || ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 105733 AGCAATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 105686 >seq112825 Length=307 Score = 109 bits (120), Expect = 9e-22 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 || || || |||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 44 ACACGCTGCCTCCTTCAGTGTAGCGCGTGTGCGGCCCAGAACATCTAAGGGCATCACAGA 103 Query 62 CCTGTTATTGCCTCA 76 |||||||||||| || Sbjct 104 CCTGTTATTGCCCCA 118 >seq245 Length=167031 Score = 100 bits (110), Expect = 5e-19 Identities = 93/116 (80%), Gaps = 3/116 (3%) Strand=Plus/Minus Query 145 TTTAGCAGGTTAAGGTCTCGTTCGT--TATCGGAATTAACCAGACAAATCACTCCACCAA 202 |||| ||| || ||||| ||||| | | ||||| ||| ||||||||| ||||||||| Sbjct 111744 TTTAATAGGCTATAGTCTCCTTCGTCTTTTTGGAATGAACTAGACAAATCGCTCCACCAA 111685 Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | | || ||||||||||||| ||||| ||||||||||||||| || ||||||| Sbjct 111684 CCAGAAATGGCCATGCACCACTACCCACCAAATCAAGAAAGAGCTCTC-ATCTGTC 111630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794241915681