Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq101527 217 3e-54 seq4722 174 3e-41 seq95738 73.4 8e-11 >seq101527 Length=647993 Score = 217 bits (240), Expect = 3e-54 Identities = 185/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||| Sbjct 159534 GGACAGTGTCAGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAATGTAACGGAGGCA 159475 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 ||||||| || |||| | ||| ||||| |||| | | || | ||| | | ||| || Sbjct 159474 CCCAAAGGTATTCTCAACATGGTCGGAAATCATGTGTAGAGCGTAAAAGTAGAAGAATGC 159415 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||| || || |||| | | |||| |||||||| ||| ||| ||||||||||||| Sbjct 159414 TTGACTGTGAGGCCTACAAGCCGAACAGGAACGAAAGTTGGGTTTAGTGATCCGGCGGTG 159355 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| ||||||||||| | ||||||||||||| ||||||||| Sbjct 159354 CTGTATGGAAAGGCCGTCGCTCAATGGATAAAAGCTACTCTGGGGATA 159307 >seq4722 Length=601 Score = 174 bits (192), Expect = 3e-41 Identities = 236/316 (75%), Gaps = 11/316 (3%) Strand=Plus/Minus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88 |||| ||| || |||||| |||| |||| |||| || ||| || || ||||||| Sbjct 327 ACGCTAGTGTTTGTGGAGCCAACGTTGAAATACCACCC-TGGTGTGTTTGAGGTTCTAAC 269 Query 89 C--GGACGACGTATAACCGTTGACGGG-ACAGTGTCAGTCGGGCAGTTTGACTGGGGCGG 145 | || | ||| || ||| |||| |||||| | ||||||||||||||||||| Sbjct 268 CTTGGTCC-CGT-TATCCGGGATCGGGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGG 211 Query 146 TCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGAT-GGAAACCAT 204 || |||||||||| |||||||||| | | ||| ||| || || | | | ||| | | | Sbjct 210 TCTCCTCCCAAAG-GTAACGGAGGAGTTCGAAGGTACGCT-AGTTACGGTCGGACATCGT 153 Query 205 G-CGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGAC 263 | | | ||||||| |||| ||| ||| |||||||||| || |||||| |||||| | Sbjct 152 GACTGATAGTGCAATGGCATAAGCGTGCTTGACTGCGAGACTGACAAGTCGAGCAGGTGC 93 Query 264 GAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAA 323 ||||| || | || |||||||| ||| ||| |||||| |||| |||||| ||||||||| Sbjct 92 GAAAGCAGGACATAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAA 33 Query 324 AGCTACCCTGGGGATA 339 || ||| ||||||||| Sbjct 32 AGGTACTCTGGGGATA 17 >seq95738 Length=4829 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| |||||| ||| | Sbjct 3710 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAAAGGTAACGCAGGTG 3769 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| |||||| ||| ||||||| ||| | || || |||||||| Sbjct 3770 TCCTAAGGCGAGCTCAGCGAGGACGGAAACCTCGCGTAGAGCAAAAGGGCAAAAG 3824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979144316576