Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq101527 192 1e-46 seq303424 183 6e-44 seq2305 125 2e-26 seq64344 109 1e-21 seq48397 100 6e-19 >seq101527 Length=647993 Score = 192 bits (212), Expect = 1e-46 Identities = 163/197 (83%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGA-CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCC 59 |||||||| || || ||||| | || |||||||| |||| || ||||| |||||| | Sbjct 163156 CTTTACAACCCATAGGGCCTTCAT-CATACACGCGGAATTG-CTCCATCAGACTTTCGTC 163213 Query 60 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119 |||||| || |||||| ||||||||||||||||||||| |||||||| ||||||||||| Sbjct 163214 CATTGTGGAAAATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGACCGTTTCTCAGTTCCA 163273 Query 120 GTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTC 179 |||| | | |||||||| ||| | | |||| ||| | ||||||||||||| ||||||| Sbjct 163274 ATGTGGCCGGACATCCTCTTAGATCGGCTACGTATCATTGCCTTGGTGAGCCGTTACCTC 163333 Query 180 ACCAACTAGCTAATCCG 196 |||||||||||||| || Sbjct 163334 ACCAACTAGCTAATACG 163350 >seq303424 Length=815 Score = 183 bits (202), Expect = 6e-44 Identities = 251/341 (74%), Gaps = 15/341 (4%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||| | |||| |||||| ||| |||||||| | | ||| ||||| |||| || Sbjct 353 CTTTACA-TACGAATTACTTCTT-CACTCACGCGGCGTCG-CTGCATCAGAGTTTCCTCC 409 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||| ||| Sbjct 410 ATTGTGCAATATTCCCCA-TGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAA 468 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | | ||| |||||||| || | ||| |||||||||||||||| ||| ||||| | Sbjct 469 TGTGGCCGTTCACCCTCTCAGGCCGGCTACTGATCGTCGCCTTGGTGGGCCGTTACCCCG 528 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG-----GCCCGAAGGTCCCC 235 ||||| |||||||| ||| | |||| ||| | | | | | | ||| Sbjct 529 CCAAC-AGCTAATCAGACGCGGATCCATCGTATACCACCGGAGTTTTTCACACCGCCCCA 587 Query 236 TGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACT 295 ||| || || | | |||||||||||||| | |||| | |||||||||| | Sbjct 588 TGCGAGCT---GT-GCGCTTATGCGGTATTAGCACCTATTTCTAAGTGTTATCCCCCTGT 643 Query 296 ACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCT 335 | ||||| || | | || ||||||||||||||||| || Sbjct 644 ATACGGCAGGTTATCCACGCGTTACTCACCCGTCCGCCACT 684 >seq2305 Length=614 Score = 125 bits (138), Expect = 2e-26 Identities = 80/87 (92%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 38 TTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAG 97 |||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 527 TTGGCTGGTTCAGGCTCTCGCCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAG 586 Query 98 TCTGGACCGTGTCTCAGTTCCAGTGTG 124 | |||||||| ||||||||||| |||| Sbjct 587 TTTGGACCGTATCTCAGTTCCAATGTG 613 >seq64344 Length=403 Score = 109 bits (120), Expect = 1e-21 Identities = 84/97 (87%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| ||||||| |||||||| | | |||||||| ||| |||| |||| |||| ||| Sbjct 308 TTTACGATCCGAAAACCTTCTTCCTC-CACGCGGCGTTG-CTGGGTCAGAGTTTCCTCCA 365 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 98 ||| ||||||||||||||||||||||||||||||||| Sbjct 366 TTGCCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 402 >seq48397 Length=443 Score = 100 bits (110), Expect = 6e-19 Identities = 82/97 (85%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 |||||| ||||| |||||| | | |||||||| | | ||| |||||| |||| |||| Sbjct 96 TTTACATACCGAAATACTTCTT-CGCTCACGCGGCGTCG-CTGCATCAGGGTTTCCCCCA 39 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 98 |||| |||||||||||||||||||||||||||||||| Sbjct 38 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068447381280